DRSC/TRiP Functional Genomics Resources

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Protein Alignment ova and Nrf1

DIOPT Version :10

Sequence 1:NP_609360.2 Gene:ova / 34362 FlyBaseID:FBgn0032197 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_017448100.1 Gene:Nrf1 / 312195 RGDID:1304603 Length:546 Species:Rattus norvegicus


Alignment Length:190 Identity:49/190 - (25%)
Similarity:81/190 - (42%) Gaps:30/190 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EKDKAQHNMISNLPLLFANGYPTSLEKITESQLENFIPFMVQCSLGHINLP--KKIDCSEPEWWP 65
            |...|...:.|.||.|..:|.|.|::|:|::||..|||.|::.|.|. ..|  .|..| :|.|||
  Rat   185 EHAPAPQEVNSELPPLTIDGIPVSVDKMTQAQLRAFIPEMLKYSTGR-GKPGWGKESC-KPIWWP 247

  Fly    66 ESAPF-----EIPLKKPKAFVGNWMEKMKEIVVICYQFHKSLFLLRFCNDLAAYEHAS------- 118
            |..|:     ::..::.|..| :|.:.::.||..||:.|....||....|......|:       
  Rat   248 EDIPWANVRSDVRTEEQKQRV-SWTQALRTIVKNCYKQHGREDLLYAFEDQQTQTQATTTHSIAH 311

  Fly   119 -------LRFINNYNSTTSLYDRRNNKLLVTFRNENMSYDRQQKNRKCLLLQKNNSSISE 171
                   ::..:|.:.|.||........:.|..      |..:......:.|.|.|::::
  Rat   312 LVPSQTVVQTFSNPDGTVSLIQVGTGATVATLA------DASELPTTVTVAQVNYSAVAD 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovaNP_609360.2 Nrf1_DNA-bind <15..105 CDD:463112 33/96 (34%)
Nrf1XP_017448100.1 Nrf1_DNA-bind 87..295 CDD:463112 38/112 (34%)
TGS_YchF_OLA1 462..537 CDD:340516
Blue background indicates that the domain is not in the aligned region.

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