DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5708 and LOC799481

DIOPT Version :10

Sequence 1:NP_609359.1 Gene:CG5708 / 34361 FlyBaseID:FBgn0032196 Length:241 Species:Drosophila melanogaster
Sequence 2:XP_009302150.4 Gene:LOC799481 / 799481 -ID:- Length:356 Species:Danio rerio


Alignment Length:219 Identity:63/219 - (28%)
Similarity:93/219 - (42%) Gaps:44/219 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NSNHTKD-TVETNSNISSSQLSFMDESSNDFNN-------QQLIHSNSL--IKVCGGCGDKISDR 88
            |:...:| |.|.:|||..|    :.|:.|..::       .:.:.|::.  ..||..|.:.|.||
Zfish    36 NARRCEDFTRELSSNICMS----LPEAKNGRSDPASPSALPETMASDAFQGKAVCTRCREHILDR 96

  Fly    89 YLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGVCSGCGETIPPSE 153
            :||...|..||..||.|..|...|:| .::|:.|...|.||..|...|  ...||.|.||:..|:
Zfish    97 HLLKVNDMCWHARCLSCSVCQTTLSE-QTTCYVREREIFCKLHYFRRF--QTWCSCCRETLHSSD 158

  Fly   154 LVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGASLVCEQDWHKL--- 215
            .|.:|...                |:||.||||..|...|..|:.:.::|..|:|...:..:   
Zfish   159 WVHRAKGN----------------VYHLACFSCFSCKRQLSTGEEFALVGEKLLCRIHYSSMLDK 207

  Fly   216 LKGPANSNGTLGQRKGKVGRPRRS 239
            |..||        .|||...|.::
Zfish   208 LNRPA--------EKGKSVSPEKA 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5708NP_609359.1 LIM1_LMO4 78..132 CDD:188772 21/53 (40%)
LIM 142..212 CDD:413332 21/69 (30%)
LOC799481XP_009302150.4 None

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