DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG5708 and lmx1ba

DIOPT Version :9

Sequence 1:	NP_001285799.1	Gene:	CG5708 / 34361	FlyBaseID:	FBgn0032196	Length:	241	Species:	Drosophila melanogaster
Sequence 2:	NP_001349521.1	Gene:	lmx1ba / 554361	ZFINID:	ZDB-GENE-050114-3	Length:	375	Species:	Danio rerio

Alignment Length:	183	Identity:	64/183 - (34%)
Similarity:	80/183 - (43%)	Gaps:	40/183 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    77 VCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGV 141
            ||.||...||||:||...|..||..||:|..|..:|.   .||::|...:.||.||..:|...
Zfish    32 VCEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLLT---MSCYSRDHKLYCKHDYQQLFATK-- 91

  Fly   142 CSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGASL 206
            ||||.|.|.|:|||.:||                ..|:||.||.|..|...|..||.:.:....|
Zfish    92 CSGCLEKISPTELVMRAL----------------ESVYHLSCFCCCVCERRLCKGDEFVLKEGQL 140

  Fly   207 VCEQDW--HKLLKGPANSN---------------GTLGQRKGKVGR--PRRSK 240
            :|:.|:  .|.|..|..|:               |..||.||....  |||.|
Zfish   141 LCKTDYEREKDLASPDLSDSDKSEDEDLDVKPEKGAGGQGKGSDDSKDPRRPK 193

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_001285799.1	LIM1_LMO4	78..132	CDD:188772	22/53 (42%)
CG5708	NP_001285799.1	LIM	142..212	CDD:413332	24/69 (35%)
lmx1ba	NP_001349521.1	LIM1_Lmx1b	33..85	CDD:188757	23/54 (43%)
		LIM	92..146	CDD:295319	24/69 (35%)
		Homeobox	195..248	CDD:306543
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910