Protein Alignment CG5708 and lhx8

DIOPT Version :10

• Sequence 1: NP_609359.1
• Gene: CG5708 / 34361
• FlyBaseID: FBgn0032196
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: XP_012816489.1
• Gene: lhx8 / 548653
• XenbaseID: XB-GENE-494997
• Length: 385
• Species: Xenopus tropicalis
• Alignment Length: 236
• Identity: 59/236 - (25%)
• Similarity: 88/236 - (37%)
• Gaps: 57/236 - (24%)

  Fly    13 AAHHQDSSSPENFAPIVIDYRNSNHTKDTVETNSNISSSQLSFMDESSNDFNNQQLIHSNSLIKV 77
            ||..:||.|....:|:   ..:|.|:......|...|                           |
 Frog    69 AAMDEDSCSSVPLSPV---SSSSPHSMPAAGLNQGKS---------------------------V 103

  Fly    78 CGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGVC 142
            |..||.:|.|:|||...|..||..||.|..|...|.. .:||:.:...|.||.||...:|..  |
 Frog   104 CSNCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGR-HTSCYIKDKDIYCKLDYFRRYGTR--C 165

  Fly   143 SGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGASLV 207
            |.||..|..::.|.:|...                |:||.||:|..|...|..|:.:.::...::
 Frog   166 SRCGRHIHATDWVRRAKGN----------------VYHLACFACYSCKRQLSTGEEFALVEEKVL 214

  Fly   208 CEQDWHKLLKG--PANSNGTLGQRKG------KVGRPRRSK 240
            |...:..:|..  .|..||.....:|      .:.:|:.:|
 Frog   215 CRVHYDCMLDNLKRAVENGNRVSVEGALLTEQDINQPKPAK 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_609359.1	LIM1_LMO4	78..132	CDD:188772	21/53 (40%)
		LIM	142..212	CDD:413332	17/69 (25%)
lhx8	XP_012816489.1	LIM1_Lhx7_Lhx8	103..158	CDD:188767	23/55 (42%)
		LIM2_Lhx7_Lhx8	165..219	CDD:188769	17/69 (25%)
		Homeodomain	255..311	CDD:459649	1/1 (100%)