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Protein Alignment CG5708 and Lmo3
DIOPT Version :9
Sequence 1: | NP_001285799.1 |
Gene: | CG5708 / 34361 |
FlyBaseID: | FBgn0032196 |
Length: | 241 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006237647.1 |
Gene: | Lmo3 / 497798 |
RGDID: | 1561357 |
Length: | 156 |
Species: | Rattus norvegicus |
Alignment Length: | 164 |
Identity: | 62/164 - (37%) |
Similarity: | 89/164 - (54%) |
Gaps: | 18/164 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 MDESSNDFNNQQL-IHSNSLIKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSC 119
|.:....|..|.| :..::..|.|.||..||.|||||.|||:|||..||||.||...|.||||:.
Rat 1 MQKQEKSFGIQMLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTL 65
Fly 120 FTRRGLILCKKDYSSMFGCSGVCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCF 184
:|:..||||::||..:||.:|.|:.|.:.||..|:|.:|... |:||.||
Rat 66 YTKANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDN----------------VYHLDCF 114
Fly 185 SCAKCGSSLRPGDRYTMLGASLVCEQDWHK-LLK 217
:|..|......||::.:....::|:.|:.: |:|
Rat 115 ACQLCNQRFCVGDKFFLKNNMILCQTDYEEGLMK 148
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000888 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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