DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5708 and LOC4576611

DIOPT Version :10

Sequence 1:NP_609359.1 Gene:CG5708 / 34361 FlyBaseID:FBgn0032196 Length:241 Species:Drosophila melanogaster
Sequence 2:XP_001237835.3 Gene:LOC4576611 / 4576611 VectorBaseID:AGAMI1_014808 Length:270 Species:Anopheles gambiae


Alignment Length:166 Identity:52/166 - (31%)
Similarity:75/166 - (45%) Gaps:23/166 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 KVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSG 140
            |.||.|.:.|:|||:.......||..||:|..|...| |...||:.|.|.:.||.||...|..| 
Mosquito     6 KTCGSCAEPITDRYIFEVNGSAWHGSCLRCTVCFCPL-ERQVSCYLRDGDMYCKSDYIKKFKTS- 68

  Fly   141 VCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGAS 205
             |:.|..:|..::.|.:|.                ..||||.||:|..||..|..|:::.:....
Mosquito    69 -CAKCARSISATDWVRRAR----------------EYVFHLACFACDSCGRQLSTGEQFAICEDR 116

  Fly   206 LVCEQDWHKLL-KGPANSNGTL---GQRKGKVGRPR 237
            ::|:..:.:|: .|..:|...|   |..|.|..|.|
Mosquito   117 VLCKTHYMELIDDGTTSSEDGLDADGNGKNKTKRIR 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5708NP_609359.1 LIM1_LMO4 78..132 CDD:188772 21/53 (40%)
LIM 142..212 CDD:413332 17/69 (25%)
LOC4576611XP_001237835.3 None

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