DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG5708 and lmo4.1

DIOPT Version :9

Sequence 1:	NP_001285799.1	Gene:	CG5708 / 34361	FlyBaseID:	FBgn0032196	Length:	241	Species:	Drosophila melanogaster
Sequence 2:	XP_012816296.1	Gene:	lmo4.1 / 448304	XenbaseID:	XB-GENE-971939	Length:	173	Species:	Xenopus tropicalis

Alignment Length:	148	Identity:	72/148 - (48%)
Similarity:	94/148 - (63%)	Gaps:	17/148 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    76 KVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSG 140
            |.|.|||.||:||:||||:|.|||:.||||.||.|.|.|:|:||:|:.|:|||:.||..:||.||
Frog    21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRLFGNSG 85

  Fly   141 VCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGAS 205
            .||.||::||.||||.:|...                |:||:||:|:.|.:.|.||||:..:..|
Frog    86 ACSACGQSIPASELVMRAQGN----------------VYHLKCFTCSTCRNRLVPGDRFHYINGS 134

  Fly   206 LVCEQDW-HKLLKGPANS 222
            |.||.|. ..|:.|..||
Frog   135 LFCEHDRPTALINGHLNS 152

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_001285799.1	LIM1_LMO4	78..132	CDD:188772	33/53 (62%)
CG5708	NP_001285799.1	LIM	142..212	CDD:413332	27/69 (39%)
lmo4.1	XP_012816296.1	LIM1_LMO4	23..77	CDD:188772	33/53 (62%)
lmo4.1	XP_012816296.1	LIM2_LMO4	87..141	CDD:188773	27/69 (39%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	94	1.000	Domainoid score	I7332
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H4927
Inparanoid	1	1.050	155	1.000	Inparanoid score	I4203
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000888
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45787
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	6.150