Sequence 1: | NP_001285799.1 | Gene: | CG5708 / 34361 | FlyBaseID: | FBgn0032196 | Length: | 241 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_729801.1 | Gene: | Lmx1a / 39406 | FlyBaseID: | FBgn0052105 | Length: | 640 | Species: | Drosophila melanogaster |
Alignment Length: | 208 | Identity: | 65/208 - (31%) |
---|---|---|---|
Similarity: | 87/208 - (41%) | Gaps: | 27/208 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 NSNHTKDTVETNSNISSSQLSFMDESSNDFNNQQLIHSNSLIKVCGGCGDKISDRYLLYALDRYW 98
Fly 99 HNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGVCSGCGETIPPSELVAKALTGIN 163
Fly 164 NIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGASLVC-EQDWHK---LLKGPANSNG 224
Fly 225 TLGQRKGKVGRPR 237 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5708 | NP_001285799.1 | LIM1_LMO4 | 78..132 | CDD:188772 | 22/53 (42%) |
LIM | 142..212 | CDD:413332 | 22/70 (31%) | ||
Lmx1a | NP_729801.1 | LIM1_Lmx1b | 275..327 | CDD:188757 | 23/54 (43%) |
LIM | 333..388 | CDD:295319 | 22/71 (31%) | ||
Homeobox | 427..480 | CDD:278475 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 47 | 0.796 | Domainoid score | I4515 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |