Protein Alignment CG5708 and CG4328

DIOPT Version :10

• Sequence 1: NP_609359.1
• Gene: CG5708 / 34361
• FlyBaseID: FBgn0032196
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: NP_648567.2
• Gene: CG4328 / 39405
• FlyBaseID: FBgn0036274
• Length: 544
• Species: Drosophila melanogaster
• Alignment Length: 175
• Identity: 54/175 - (30%)
• Similarity: 77/175 - (44%)
• Gaps: 43/175 - (24%)

  Fly    78 CGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGVC 142
            |..|...|.|||::..::..:|.|||||..|...|..   ||:.|.|.:.|:.||..:: ....|
  Fly   199 CAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVH---SCYAREGKLYCRVDYERLY-IRNHC 259

  Fly   143 SGCGETIPPSELVAKALTGINNIDLQNQQKQIINC---VFHLRCFSCAKCGSSLRPGDRYTMLGA 204
            .|||..|...|||                   :.|   ||||:||:|..||:.|:.|::|.:...
  Fly   260 LGCGLKIAADELV-------------------MRCHENVFHLKCFACVVCGALLKKGEQYVVKQG 305

  Fly   205 SLVCEQDWHK---LLKG---------PANSNGTLGQRKGKVGRPR 237
            .|.|..|:.|   :|:|         |...:|..|.:     |||
  Fly   306 QLFCRFDYEKEVEMLQGYDFYGDELFPPKLDGRRGPK-----RPR 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_609359.1	LIM1_LMO4	78..132	CDD:188772	19/53 (36%)
		LIM	142..212	CDD:413332	23/72 (32%)
CG4328	NP_648567.2	LIM1_Lmx1b	199..251	CDD:188757	20/54 (37%)
		LIM	259..313	CDD:413332	23/72 (32%)
		COG5576	<332..439	CDD:227863	6/19 (32%)
		HOX	341..393	CDD:197696	3/10 (30%)