Protein Alignment CG5708 and Lmo4

DIOPT Version :10

• Sequence 1: NP_609359.1
• Gene: CG5708 / 34361
• FlyBaseID: FBgn0032196
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: XP_063138297.1
• Gene: Lmo4 / 362051
• RGDID: 1305670
• Length: 166
• Species: Rattus norvegicus
• Alignment Length: 148
• Identity: 71/148 - (47%)
• Similarity: 94/148 - (63%)
• Gaps: 17/148 - (11%)

  Fly    76 KVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSG 140
            |.|.|||.||:||:||||:|.|||:.||||.||.|.|.::|:||:|:.|:|||:.||..:||.||
  Rat    21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRLFGNSG 85

  Fly   141 VCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGAS 205
            .||.||::||.||||.:|...                |:||:||:|:.|.:.|.||||:..:..|
  Rat    86 ACSACGQSIPASELVMRAQGN----------------VYHLKCFTCSTCRNRLVPGDRFHYINGS 134

  Fly   206 LVCEQDW-HKLLKGPANS 222
            |.||.|. ..|:.|..||
  Rat   135 LFCEHDRPTALINGHLNS 152

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_609359.1	LIM1_LMO4	78..132	CDD:188772	32/53 (60%)
		LIM	142..212	CDD:413332	27/69 (39%)
Lmo4	XP_063138297.1	None