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Protein Alignment CG5708 and Lmo4
DIOPT Version :9
Sequence 1: | NP_001285799.1 |
Gene: | CG5708 / 34361 |
FlyBaseID: | FBgn0032196 |
Length: | 241 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001009708.1 |
Gene: | Lmo4 / 362051 |
RGDID: | 1305670 |
Length: | 165 |
Species: | Rattus norvegicus |
Alignment Length: | 148 |
Identity: | 71/148 - (47%) |
Similarity: | 94/148 - (63%) |
Gaps: | 17/148 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 76 KVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSG 140
|.|.|||.||:||:||||:|.|||:.||||.||.|.|.::|:||:|:.|:|||:.||..:||.||
Rat 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRLFGNSG 85
Fly 141 VCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGAS 205
.||.||::||.||||.:|... |:||:||:|:.|.:.|.||||:..:..|
Rat 86 ACSACGQSIPASELVMRAQGN----------------VYHLKCFTCSTCRNRLVPGDRFHYINGS 134
Fly 206 LVCEQDW-HKLLKGPANS 222
|.||.|. ..|:.|..||
Rat 135 LFCEHDRPTALINGHLNS 152
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
92 |
1.000 |
Domainoid score |
I7483 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H4927 |
Inparanoid |
1 |
1.050 |
153 |
1.000 |
Inparanoid score |
I4241 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000888 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_109625 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR45787 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
9 | 8.960 |
|
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