DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5708 and LOC3291866

DIOPT Version :10

Sequence 1:NP_609359.1 Gene:CG5708 / 34361 FlyBaseID:FBgn0032196 Length:241 Species:Drosophila melanogaster
Sequence 2:XP_061513659.1 Gene:LOC3291866 / 3291866 VectorBaseID:AGAMI1_002622 Length:464 Species:Anopheles gambiae


Alignment Length:285 Identity:82/285 - (28%)
Similarity:116/285 - (40%) Gaps:84/285 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 HHQDSSSPENF-APIVIDYRNSNHTKDTVETNSNISSSQLS-------------FMDESSNDFNN 65
            ||..:.|..:| :|..:.....|:..|...::.:.|||.|:             ...||||:..:
Mosquito    72 HHLYADSCHSFESPDRLIADRPNYYADLNRSDCSDSSSVLNSCIQLKSEPPGGPSSPESSNELPS 136

  Fly    66 QQLIHSNSLIKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKK 130
            ..|       ..|.||...|.||:.|.|::|.||..||:|..|...| |..:|||:|.|.|.||.
Mosquito   137 TGL-------DECAGCDMPIQDRFYLSAVERKWHASCLQCCICRQTL-EGANSCFSRDGNIYCKT 193

  Fly   131 DYSSMFGCSGVCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRP 195
            ||..:|| |..||.|..:|..||||.:|.                :.|||:||||||.|.:.|..
Mosquito   194 DYYRVFG-SRRCSKCLASISSSELVMRAR----------------HLVFHIRCFSCAVCNTPLNK 241

  Fly   196 GDRYTMLGASLVCEQDWHKLLK----------------------------GPANS---------- 222
            ||.||:..:::.|.......|:                            .|::|          
Mosquito   242 GDHYTIRDSAVFCRSHIELPLEAATTPGLPGMPMQCPYQSQYGTSPVAPLSPSDSTTSGGKLNPA 306

  Fly   223 -----NGTLG--QRKGKVGRPRRSK 240
                 :|..|  |:..:.||||:.|
Mosquito   307 TYYPPHGVTGLPQQPRQKGRPRKRK 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5708NP_609359.1 LIM1_LMO4 78..132 CDD:188772 25/53 (47%)
LIM 142..212 CDD:413332 25/69 (36%)
LOC3291866XP_061513659.1 None

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