DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5708 and LOC3291599

DIOPT Version :10

Sequence 1:NP_609359.1 Gene:CG5708 / 34361 FlyBaseID:FBgn0032196 Length:241 Species:Drosophila melanogaster
Sequence 2:XP_555680.4 Gene:LOC3291599 / 3291599 VectorBaseID:AGAMI1_010862 Length:270 Species:Anopheles gambiae


Alignment Length:285 Identity:122/285 - (42%)
Similarity:153/285 - (53%) Gaps:59/285 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNATFHSYRDILAAHHQDSSSPENFAPIVIDYRNSNHTKDTVETNSNIS---------------- 49
            ||..:|.|.|:.:.|   |.||:|         ..::.:.|...|.:..                
Mosquito     1 MNPHYHPYSDLSSPH---SPSPDN---------AGSYPQLTPHHNGHGGGGGGGGGGGGGGGGGG 53

  Fly    50 --SSQLSFMDESSNDFNNQQLIHSNSLIKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAML 112
              :|.:|.|| ....|:.....:....:|.|.|||.||::|:.|:||||||||.||||.||||||
Mosquito    54 GPNSMVSQMD-GQQGFHQMNSGNGGGPVKHCAGCGGKITERFFLHALDRYWHNSCLKCSCCGAML 117

  Fly   113 AEVGSSCFTRRGLILCKKDYSSMFGCSGVCSGCGETIPPSELVAKAL--TGINN-----IDLQNQ 170
            |::||||:||.|:||||.|||.:|| ||.||.|.:|||.:|.|.:..  |.|||     .:..|.
Mosquito   118 ADIGSSCYTRSGMILCKADYSRLFG-SGACSACHQTIPANEFVMRTTSHTTINNNLNNAANNNNN 181

  Fly   171 QKQIIN-------------------CVFHLRCFSCAKCGSSLRPGDRYTMLGASLVCEQDWHKLL 216
            |...:|                   .||||:||.|:||||.|..||||.|||.|||||.|||||:
Mosquito   182 QNGTVNNNNNNNNNNNNNGQSVPQHHVFHLKCFQCSKCGSHLVQGDRYYMLGGSLVCEPDWHKLV 246

  Fly   217 KGPANSNGTLGQRKGKVGRPRRSKD 241
            | ..||......|||||||||||:|
Mosquito   247 K-TTNSQTNPPLRKGKVGRPRRSRD 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5708NP_609359.1 LIM1_LMO4 78..132 CDD:188772 38/53 (72%)
LIM 142..212 CDD:413332 39/95 (41%)
LOC3291599XP_555680.4 None

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