Protein Alignment CG5708 and lhx5

DIOPT Version :10

• Sequence 1: NP_609359.1
• Gene: CG5708 / 34361
• FlyBaseID: FBgn0032196
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: NP_571293.1
• Gene: lhx5 / 30465
• ZFINID: ZDB-GENE-980526-484
• Length: 399
• Species: Danio rerio
• Alignment Length: 136
• Identity: 50/136 - (36%)
• Similarity: 67/136 - (49%)
• Gaps: 22/136 - (16%)

  Fly    78 CGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGVC 142
            |.||...|.||:||..|||.||..|::|..|...|.|   .||:|.|.:.||.|:...||..  |
Zfish     5 CAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTE---KCFSRDGKLYCKIDFFRRFGTK--C 64

  Fly   143 SGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDR-YTMLGASL 206
            :||.:.|.||:||.:|.:.                ||||.||:|..|...|..|:. |.:.....
Zfish    65 AGCLQGISPSDLVRRARSK----------------VFHLNCFTCMVCNKQLSTGEELYVIDENKF 113

  Fly   207 VCEQDW 212
            ||::|:
Zfish   114 VCKEDY 119

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_609359.1	LIM1_LMO4	78..132	CDD:188772	24/53 (45%)
		LIM	142..212	CDD:413332	22/70 (31%)
lhx5	NP_571293.1	LIM1_Lhx1_Lhx5	5..56	CDD:188753	24/53 (45%)
		LIM2_Lhx1_Lhx5	64..119	CDD:188761	22/70 (31%)
		COG5576	126..>242	CDD:227863
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	136..185
		Homeodomain	181..237	CDD:459649
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	301..399