Protein Alignment CG5708 and lhx3

DIOPT Version :10

• Sequence 1: NP_609359.1
• Gene: CG5708 / 34361
• FlyBaseID: FBgn0032196
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: XP_073805886.1
• Gene: lhx3 / 30455
• ZFINID: ZDB-GENE-980526-131
• Length: 411
• Species: Danio rerio
• Alignment Length: 193
• Identity: 61/193 - (31%)
• Similarity: 87/193 - (45%)
• Gaps: 44/193 - (22%)

  Fly    59 SSNDFNNQQLIHSNSLIKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRR 123
            |..:..|.....|:..|.||.||...|.||::|..|||:||:.||||..|.:.||:   .||:|.
Zfish     9 SCQNAGNYTRYSSSQDIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLAD---KCFSRG 70

  Fly   124 GLILCKKDY-------------SSMFGCSGVCSGCGETIPPSELVAKALTGINNIDLQNQQKQII 175
            ..:.||.|:             |..||..  |:.|.:.|||:::|.:|.
Zfish    71 DSVYCKDDFFKSPLTRVCLCFVSRRFGTK--CAACQQGIPPTQVVRRAQ---------------- 117

  Fly   176 NCVFHLRCFSCAKCGSSLRPGDRYTMLGAS-LVCEQDWHKLLKGPANSNGTLGQRKGKVGRPR 237
            :.|:||.||:|..|...|..||.|.::..| |||:.|:....:..|:|...         |||
Zfish   118 DFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKADYETAKQREADSTAK---------RPR 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_609359.1	LIM1_LMO4	78..132	CDD:188772	24/53 (45%)
		LIM	142..212	CDD:413332	22/70 (31%)
lhx3	XP_073805886.1	None