Protein Alignment CG5708 and lmo2

DIOPT Version :10

• Sequence 1: NP_609359.1
• Gene: CG5708 / 34361
• FlyBaseID: FBgn0032196
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: NP_571186.1
• Gene: lmo2 / 30332
• ZFINID: ZDB-GENE-980526-419
• Length: 159
• Species: Danio rerio
• Alignment Length: 152
• Identity: 55/152 - (36%)
• Similarity: 78/152 - (51%)
• Gaps: 26/152 - (17%)

  Fly    78 CGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGVC 142
            ||||...|.||:.|.|:::|||..||.|..||..|.|||...:.:.|..||::||..:||..|:|
Zfish    30 CGGCQQSIGDRFFLKAIEQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLC 94

  Fly   143 SGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGASLV 207
            :.|.:.|...|:..:                :.:.|:||.||.||.|......||||.::.:.:|
Zfish    95 ASCEKRIRAFEMTMR----------------VRDKVYHLECFKCAACQKHFCVGDRYLLINSDIV 143

  Fly   208 CEQD---WHKLLKGPANSNGTL 226
            ||||   |.||       ||::
Zfish   144 CEQDIFEWTKL-------NGSI 158

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_609359.1	LIM1_LMO4	78..132	CDD:188772	24/53 (45%)
		LIM	142..212	CDD:413332	21/72 (29%)
lmo2	NP_571186.1	LIM1_LMO2	30..85	CDD:188770	25/54 (46%)
		LIM2_LMO2	94..149	CDD:188771	21/70 (30%)