DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5708 and isl2b

DIOPT Version :10

Sequence 1:NP_609359.1 Gene:CG5708 / 34361 FlyBaseID:FBgn0032196 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_571039.1 Gene:isl2b / 30151 ZFINID:ZDB-GENE-990415-133 Length:358 Species:Danio rerio


Alignment Length:174 Identity:58/174 - (33%)
Similarity:82/174 - (47%) Gaps:33/174 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SFMDESSNDFNNQQLIHS--NSLIKVCGGCGDKISDRYLL-YALDRYWHNGCLKCHCCGAMLAEV 115
            ||:|:..:        ||  .|.:.:|.|||.:|.|:|:| .:.|..||..||||..|...|.|.
Zfish     9 SFLDDMGD--------HSKKKSGLAMCVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDET 65

  Fly   116 GSSCFTRRGLILCKKDYSSMFGCSGVCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFH 180
             .:||.|.|...||:||..:||..  |:.|......|:||.:|.                :.|:|
Zfish    66 -CTCFVRDGKTYCKRDYVRLFGIK--CAKCTLGFSSSDLVMRAR----------------DSVYH 111

  Fly   181 LRCFSCAKCGSSLRPGDRYTMLGASLVCEQDWHKLL--KGPANS 222
            :.||.|:.|...|.|||.:::....|:|..| |.|.  :||..|
Zfish   112 IECFRCSVCSRQLLPGDEFSVRDEELLCRAD-HGLALERGPGGS 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5708NP_609359.1 LIM1_LMO4 78..132 CDD:188772 24/54 (44%)
LIM 142..212 CDD:413332 18/69 (26%)
isl2bNP_571039.1 LIM1_Isl 27..81 CDD:188752 24/54 (44%)
LIM2_Isl2 89..143 CDD:188855 19/70 (27%)
HOX 191..247 CDD:197696
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..358
Blue background indicates that the domain is not in the aligned region.

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