DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG5708 and Lmo1

DIOPT Version :9

Sequence 1:	NP_001285799.1	Gene:	CG5708 / 34361	FlyBaseID:	FBgn0032196	Length:	241	Species:	Drosophila melanogaster
Sequence 2:	XP_038954443.1	Gene:	Lmo1 / 245979	RGDID:	621166	Length:	199	Species:	Rattus norvegicus

Alignment Length:	232	Identity:	50/232 - (21%)
Similarity:	85/232 - (36%)	Gaps:	71/232 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    24 NFAPIV---IDYRNSNHTKDTVETNSNISSSQLSFMDESSNDFNNQQLIHSNSLIKVCGGCGDKI 85
            |.|.:|   :....:|.|...:|..::..|:.|..::.:....:.::|          ||
  Rat     3 NGAKLVCRCLSLHQTNRTNRGLEAPTSRLSAHLHLLELAQQKGSEEEL----------GG----- 52

  Fly    86 SDRYLLYALDRYWHNGC----------LKCHCC-----GAMLAE----VGSSCFTRRGLIL---- 127
                 |..|:....|.|          |....|     |.|.::    |||......||:|
  Rat    53 -----LRPLEHLAKNCCEWGGSGLPVLLSLELCSQQLRGGMPSQRDHCVGSPRNLFWGLVLGEKW 112

  Fly   128 -CKKDY---SSMFGCSGVCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAK 188
             |...:   ..:||.:|.|:.|.:.||..|:|.:|...                |:||.||:|..
  Rat   113 CCPGSFILRKRLFGTTGNCAACSKLIPAFEMVMRARDN----------------VYHLDCFACQL 161

  Fly   189 CGSSLRPGDRYTMLGASLVCEQDWHKLLKGPANSNGT 225
            |......||::.:....::|:.|:.:     .:.|||
  Rat   162 CNQRFCVGDKFFLKNNMILCQMDYEE-----GHLNGT 193

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_001285799.1	LIM1_LMO4	78..132	CDD:188772	17/77 (22%)
CG5708	NP_001285799.1	LIM	142..212	CDD:413332	17/69 (25%)
Lmo1	XP_038954443.1	LIM2_LMO1_LMO3	131..185	CDD:188775	17/69 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000888
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.000