Protein Alignment CG5708 and ceh-14

DIOPT Version :10

• Sequence 1: NP_609359.1
• Gene: CG5708 / 34361
• FlyBaseID: FBgn0032196
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: NP_509273.1
• Gene: ceh-14 / 181012
• WormBaseID: WBGene00000438
• Length: 351
• Species: Caenorhabditis elegans
• Alignment Length: 178
• Identity: 55/178 - (30%)
• Similarity: 79/178 - (44%)
• Gaps: 27/178 - (15%)

  Fly    62 DFNNQQLIHSNSLIKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLI 126
            ||:|....|.|:...:|..|..||.||::.....|.:|:.||:|..|   ..|:|::||.|...:
 Worm    32 DFSNVNAGHPNNEEAICSLCDKKIRDRFVSKVNGRCYHSSCLRCSTC---KDELGATCFLREDSM 93

  Fly   127 LCKKDYSSMFGCSGVCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGS 191
            .|:..:...||..  ||.|.|.|.|..:|.||                .|.|:|:.||.|..|..
 Worm    94 YCRAHFYKKFGTK--CSSCNEGIVPDHVVRKA----------------SNHVYHVECFQCFICKR 140

  Fly   192 SLRPGDRYTMLG--ASLVCEQDWHKLLKGPANSNGTLGQRKGKVGRPR 237
            ||..|:.:.::.  |.|||:.|:.:......|.....|..|    |||
 Worm   141 SLETGEEFYLIADDARLVCKDDYEQARDKHCNELEGDGSNK----RPR 184

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_609359.1	LIM1_LMO4	78..132	CDD:188772	18/53 (34%)
		LIM	142..212	CDD:413332	23/71 (32%)
ceh-14	NP_509273.1	LIM	48..103	CDD:395333	18/57 (32%)
		LIM2_Lhx3_Lhx4	107..163	CDD:188762	23/71 (32%)
		COG5576	<172..295	CDD:227863	6/17 (35%)
		Homeodomain	181..237	CDD:459649	4/8 (50%)