Protein Alignment CG5708 and Lhx1

DIOPT Version :10

• Sequence 1: NP_609359.1
• Gene: CG5708 / 34361
• FlyBaseID: FBgn0032196
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: NP_032524.1
• Gene: Lhx1 / 16869
• MGIID: 99783
• Length: 406
• Species: Mus musculus
• Alignment Length: 136
• Identity: 50/136 - (36%)
• Similarity: 67/136 - (49%)
• Gaps: 22/136 - (16%)

  Fly    78 CGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGVC 142
            |.||...|.||:||..|||.||..|::|..|...|.|   .||:|.|.:.||.|:...||..  |
Mouse     4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE---KCFSREGKLYCKNDFFRCFGTK--C 63

  Fly   143 SGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDR-YTMLGASL 206
            :||.:.|.||:||.:|.:.                ||||.||:|..|...|..|:. |.:.....
Mouse    64 AGCAQGISPSDLVRRARSK----------------VFHLNCFTCMMCNKQLSTGEELYIIDENKF 112

  Fly   207 VCEQDW 212
            ||::|:
Mouse   113 VCKEDY 118

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_609359.1	LIM1_LMO4	78..132	CDD:188772	24/53 (45%)
		LIM	142..212	CDD:413332	22/70 (31%)
Lhx1	NP_032524.1	LIM1_Lhx1_Lhx5	4..55	CDD:188753	24/53 (45%)
		LIM2_Lhx1_Lhx5	63..118	CDD:188761	22/70 (31%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	128..189
		Homeodomain	181..237	CDD:459649
		dnaA	<263..>382	CDD:455861
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	294..372