DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5708 and tup

DIOPT Version :10

Sequence 1:NP_609359.1 Gene:CG5708 / 34361 FlyBaseID:FBgn0032196 Length:241 Species:Drosophila melanogaster
Sequence 2:XP_061512449.1 Gene:tup / 1279631 VectorBaseID:AGAMI1_012440 Length:459 Species:Anopheles gambiae


Alignment Length:189 Identity:63/189 - (33%)
Similarity:87/189 - (46%) Gaps:27/189 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NHTKDTVETNSNISSSQLSFMDESSNDFNNQQLIH-SNSLIKVCGGCGDKISDRYLL-YALDRYW 98
            ||....|:. |.:.:..|..:|.|.:..|    || ....:.:|.|||.:|.|:|:| .|.|..|
Mosquito    18 NHRGGLVQP-SLVMNHHLDSLDSSCHGPN----IHPKKERLSLCVGCGGQIHDQYILRVAPDLEW 77

  Fly    99 HNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGVCSGCGETIPPSELVAKALTGIN 163
            |..||||..|...|.| ..:||.|.|...||:||..:||..  |..||.:...::.|.:|.|.| 
Mosquito    78 HAACLKCQECRQFLDE-SCTCFVRDGKTYCKRDYVRLFGTK--CDKCGSSFSKNDFVMRAKTKI- 138

  Fly   164 NIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTML-GASLVCEQDWHKLLKGPAN 221
                           :|:.||.|:.|...|.|||.:.:. |.||.|::|...|.|...|
Mosquito   139 ---------------YHIECFRCSACARQLIPGDEFALRDGGSLYCKEDHDHLEKSSQN 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5708NP_609359.1 LIM1_LMO4 78..132 CDD:188772 25/54 (46%)
LIM 142..212 CDD:413332 20/70 (29%)
tupXP_061512449.1 None

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