DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5708 and LOC1277139

DIOPT Version :10

Sequence 1:NP_609359.1 Gene:CG5708 / 34361 FlyBaseID:FBgn0032196 Length:241 Species:Drosophila melanogaster
Sequence 2:XP_061503482.1 Gene:LOC1277139 / 1277139 VectorBaseID:AGAMI1_004350 Length:313 Species:Anopheles gambiae


Alignment Length:167 Identity:51/167 - (30%)
Similarity:81/167 - (48%) Gaps:23/167 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 IKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCS 139
            ::.|..||:.|||::||......||:.||:|..|...| :...|||.|...|.||.||:..||..
Mosquito     5 LRSCTACGEPISDQFLLDVGGCSWHSACLRCCICHTPL-DHQPSCFLRERQIYCKTDYTKRFGTK 68

  Fly   140 GVCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGA 204
              |:.|..||..::.|.:|.      ||          :|||.||:|..||..|..|:::.::..
Mosquito    69 --CARCSRTISATDWVRRAR------DL----------IFHLACFACDSCGRQLSTGEQFALVDD 115

  Fly   205 SLVCEQDWHKLLK-GPANSNGTLG---QRKGKVGRPR 237
            .::|:..:.::.. |.::.:|...   |:..|..|.|
Mosquito   116 KVLCKTHYSEMFDCGTSSDDGCEADGYQKNNKTKRVR 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5708NP_609359.1 LIM1_LMO4 78..132 CDD:188772 22/53 (42%)
LIM 142..212 CDD:413332 19/69 (28%)
LOC1277139XP_061503482.1 None

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