DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5708 and LOC1274816

DIOPT Version :10

Sequence 1:NP_609359.1 Gene:CG5708 / 34361 FlyBaseID:FBgn0032196 Length:241 Species:Drosophila melanogaster
Sequence 2:XP_061498756.1 Gene:LOC1274816 / 1274816 VectorBaseID:AGAMI1_000762 Length:712 Species:Anopheles gambiae


Alignment Length:138 Identity:51/138 - (36%)
Similarity:68/138 - (49%) Gaps:20/138 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGV 141
            :||.|...|.|||::..:|..:|..||:|..|...|..   |||.|.|.:.|:.||..::| ...
Mosquito   153 LCGQCCGPICDRYIMKVVDITYHERCLQCTSCSIRLMH---SCFMRDGKLYCRFDYERLYG-RNR 213

  Fly   142 CSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGASL 206
            |.||||.|...|||.:||..                ||||:||.|..||..|:.||:|.:..:.|
Mosquito   214 CLGCGEKIGADELVMRALDN----------------VFHLKCFICVVCGVRLQKGDQYVIKQSQL 262

  Fly   207 VCEQDWHK 214
            .|..|:.|
Mosquito   263 FCRPDYEK 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5708NP_609359.1 LIM1_LMO4 78..132 CDD:188772 20/53 (38%)
LIM 142..212 CDD:413332 26/69 (38%)
LOC1274816XP_061498756.1 None

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