DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5708 and LOC1272655

DIOPT Version :10

Sequence 1:NP_609359.1 Gene:CG5708 / 34361 FlyBaseID:FBgn0032196 Length:241 Species:Drosophila melanogaster
Sequence 2:XP_061510153.1 Gene:LOC1272655 / 1272655 VectorBaseID:AGAMI1_009758 Length:357 Species:Anopheles gambiae


Alignment Length:178 Identity:65/178 - (36%)
Similarity:98/178 - (55%) Gaps:23/178 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DTVETNSNISSSQL-SFMDESSNDFNNQQLIHSNSLIKVCGGCGDKISDRYLLYALDRYWHNGCL 103
            ||.:...|..::.: |.:..::|      |:.:..|.|.|.|||.:|::|:||.|||.:||..||
Mosquito    31 DTRQLXPNTPATTIQSSVSATAN------LVAATGLAKDCAGCGKRITERFLLKALDIFWHEDCL 89

  Fly   104 KCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGVCSGCGETIPPSELVAKALTGINNIDLQ 168
            ||.||...|.||||:.:|:..|||||:||..:||.:|.|:.|.:.||..|:|.:|.         
Mosquito    90 KCGCCDCRLGEVGSTLYTKANLILCKRDYLRLFGTTGYCAACNKVIPAFEMVMRAK--------- 145

  Fly   169 NQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGASLVCEQDWHKLL 216
                   |.|:||.||:|.:|......|||:.:....::||.|:.:.|
Mosquito   146 -------NNVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEERL 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5708NP_609359.1 LIM1_LMO4 78..132 CDD:188772 30/53 (57%)
LIM 142..212 CDD:413332 20/69 (29%)
LOC1272655XP_061510153.1 None

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