Protein Alignment CG5708 and Lmx1b

DIOPT Version :10

• Sequence 1: NP_609359.1
• Gene: CG5708 / 34361
• FlyBaseID: FBgn0032196
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: XP_063139064.1
• Gene: Lmx1b / 114501
• RGDID: 620843
• Length: 410
• Species: Rattus norvegicus
• Alignment Length: 187
• Identity: 62/187 - (33%)
• Similarity: 82/187 - (43%)
• Gaps: 44/187 - (23%)

  Fly    77 VCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSGV 141
            ||.||...||||:|:...:..||..||:|..|...|.   :||:.|...:.||:||..:|...
  Rat    55 VCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALT---TSCYFRDRKLYCKQDYQQLFAAK-- 114

  Fly   142 CSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGASL 206
            ||||.|.|.|:|.|.:||                .||:||.||.|..|...||.||.:.:....|
  Rat   115 CSGCMEKIAPTEFVMRAL----------------ECVYHLGCFCCCVCERQLRKGDEFVLKEGQL 163

  Fly   207 VCEQDWHK---LLKG-------------------PANSNGTLGQRKGKVGR-PRRSK 240
            :|:.|:.|   ||..                   ||...|:..:..|..|: |||.|
  Rat   164 LCKGDYEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQNKGSGDDGKDPRRPK 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_609359.1	LIM1_LMO4	78..132	CDD:188772	20/53 (38%)
		LIM	142..212	CDD:413332	25/69 (36%)
Lmx1b	XP_063139064.1	None