Protein Alignment CG5708 and lmx1b.2

DIOPT Version :10

• Sequence 1: NP_609359.1
• Gene: CG5708 / 34361
• FlyBaseID: FBgn0032196
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: XP_031755234.1
• Gene: lmx1b.2 / 100497942
• XenbaseID: XB-GENE-920041
• Length: 374
• Species: Xenopus tropicalis
• Alignment Length: 179
• Identity: 58/179 - (32%)
• Similarity: 86/179 - (48%)
• Gaps: 35/179 - (19%)

  Fly    76 KVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFGCSG 140
            :||.|||:.||||:||...||.||..|:||..|   |..:..:|:.|...:.||:||..:|...
 Frog    25 EVCAGCGNTISDRFLLRVNDRSWHECCVKCAAC---LQILSGTCYYRNRQLYCKEDYDKLFATK- 85

  Fly   141 VCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGAS 205
             |:.|.:|:.||||:.:.|:.                |:|:.||.|.:|...|..||.:.:....
 Frog    86 -CNSCLKTVLPSELIMRVLSN----------------VYHVACFFCCECERRLERGDEFVLKEGQ 133

  Fly   206 LVCEQDWHK-------LLKGPANS------NGTLGQRKGKVGR-PRRSK 240
            |:|..|:.:       |...|:.|      :|...|.|...|: |:|||
 Frog   134 LLCRSDYEREKEMLSALSLTPSGSVKSEDEDGASLQGKSDEGKDPKRSK 182

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5708	NP_609359.1	LIM1_LMO4	78..132	CDD:188772	23/53 (43%)
		LIM	142..212	CDD:413332	19/69 (28%)
lmx1b.2	XP_031755234.1	LIM1_Lmx1b	27..79	CDD:188757	24/54 (44%)
		LIM	86..140	CDD:413332	19/69 (28%)
		Homeodomain	182..238	CDD:459649	1/1 (100%)