DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5708 and zfhx3

DIOPT Version :10

Sequence 1:NP_609359.1 Gene:CG5708 / 34361 FlyBaseID:FBgn0032196 Length:241 Species:Drosophila melanogaster
Sequence 2:XP_002937624.2 Gene:zfhx3 / 100495855 XenbaseID:XB-GENE-853731 Length:3619 Species:Xenopus tropicalis


Alignment Length:90 Identity:25/90 - (27%)
Similarity:33/90 - (36%) Gaps:36/90 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 CKKDYSSMFGCSGVCSGCGETIPPS-------------------ELVAKALTGINNIDLQNQQKQ 173
            ||||      .||.||. ...:||.                   |||.:     .|.:.|..||:
 Frog  1896 CKKD------PSGSCSD-NFLLPPRIASDARGNATKALLENFGFELVIQ-----YNENKQKAQKR 1948

  Fly   174 II-----NCVFHLRCFSCAKCGSSL 193
            .|     :|:..|.|.||.|..|::
 Frog  1949 NIKGDQTDCLDKLECNSCGKMFSNI 1973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5708NP_609359.1 LIM1_LMO4 78..132 CDD:188772 3/3 (100%)
LIM 142..212 CDD:413332 19/76 (25%)
zfhx3XP_002937624.2 C2H2 Zn finger 663..683 CDD:275368
C2H2 Zn finger 718..735 CDD:275368
C2H2 Zn finger 1365..1385 CDD:275368
C2H2 Zn finger 1403..1423 CDD:275371
C2H2 Zn finger 1431..1452 CDD:275371
C2H2 Zn finger 1547..1569 CDD:275368
C2H2 Zn finger 1598..1616 CDD:275368
HOX 2122..2178 CDD:197696
Homeodomain 2220..2276 CDD:459649
COG5576 2590..2717 CDD:227863
Homeodomain 2621..2677 CDD:459649
Homeodomain 2923..2979 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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