DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and AT5G57480

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_200556.1 Gene:AT5G57480 / 835852 AraportID:AT5G57480 Length:520 Species:Arabidopsis thaliana


Alignment Length:416 Identity:114/416 - (27%)
Similarity:187/416 - (44%) Gaps:84/416 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 WLLKWITIRGARKTQHLSVETN---FVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERTREQQ 123
            :|...::|.|.|.:...:|.::   |..::|.:|..:::.:..:          |..|...|:.|
plant    71 YLSSSVSIAGNRLSLTRAVNSSSITFGLSNNDSIVDTFNGVTVL----------WEHVVTQRQTQ 125

  Fly   124 TLDLHMGVPWETV-------TLTAFGNNKGI----YFD-ILEEARQLALEATEGKTVLYT----- 171
            |.      .|..:       ||.....:|.:    |.| |:|.|.::..:..:  .:|||     
plant   126 TF------AWRPLPEEKRGFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQD--RLLYTNSRGG 182

  Fly   172 ---AMGAEWR--PFGHPRRRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYG 231
               :.|..|.  ||.||....   ::.:|....|:|:.|.:||.:..::|.:.|..::|||||||
plant   183 SLDSRGHPWESVPFKHPSTFE---TLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKRGYLLYG 244

  Fly   232 PPGCGKSSFITALAGELEYSVCLLNLSERGLTDDRLNHLLNVAPEQSIILLEDIDAA--FVSREA 294
            |||.||||.|.|:|..|.|.:..|.|:|.. ::..|..||.....:|||::||||.:  ..:|:.
plant   245 PPGTGKSSMIAAMANYLGYDIYDLELTEVH-SNSELRKLLMKTSSKSIIVIEDIDCSINLTNRKK 308

  Fly   295 ----TPQQKSAFDGL-------------------NRITFSGLLNCLDGVGST--EARIVFMTTNY 334
                ...|:|.:|..                   |.||.|||||..||:.|.  ..||...|||:
plant   309 NSSNVSSQRSYYDAETRNGSGSGSGGSGEEGGNGNTITLSGLLNFTDGLWSCCGSERIFVFTTNH 373

  Fly   335 IDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNFFA------SSDTTKAEEFGKRVNSFGRSAS 393
            |::|||||:|.||:|:..|:.:|....|:.:.||:..      :.|..|..|....    ....:
plant   374 IEKLDPALLRSGRMDMHIYMSFCNFPSLKILLKNYLGYGVEDINGDVLKEMEMVVE----KAEMT 434

  Fly   394 PAQIQGFFMKHKLSSPQTVIDSCEDI 419
            ||.:....:|::....:.:.:..||:
plant   435 PADVSEALIKNRRDKEKAIRELLEDL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 31/154 (20%)
RecA-like_BCS1 202..354 CDD:410918 68/178 (38%)
AT5G57480NP_200556.1 AAA_assoc 26..119 CDD:405113 9/57 (16%)
P-loop_NTPase 159..>261 CDD:422963 37/106 (35%)
RecA-like_BCS1 215..393 CDD:410918 68/178 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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