Protein Alignment CG4908 and VAR1

DIOPT Version :9

• Sequence 1: NP_609358.1
• Gene: CG4908 / 34360
• FlyBaseID: FBgn0032195
• Length: 431
• Species: Drosophila melanogaster
• Sequence 2: NP_568604.1
• Gene: VAR1 / 834232
• AraportID: AT5G42270
• Length: 704
• Species: Arabidopsis thaliana
• Alignment Length: 152
• Identity: 53/152 - (34%)
• Similarity: 71/152 - (46%)
• Gaps: 16/152 - (10%)

  Fly   208 DFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNLSE-----RGLTDDRL 267
            ||:|:...||..|....:|.||.||||.||:....|:|||..........||     .|:...|:
plant   267 DFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRV 331

  Fly   268 NHLLNVAPEQS--IILLEDIDAAFVSREATPQQKSAFDGLN---RITFSGLLNCLDGVGSTEARI 327
            ..|...|..::  |:.:::|||  |.|    |:.:...|.|   ..|.:.||..:||.......|
plant   332 RDLFEKAKSKAPCIVFIDEIDA--VGR----QRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVI 390

  Fly   328 VFMTTNYIDRLDPALVRPGRID 349
            |...||..|.||.||:||||.|
plant   391 VLAATNRPDVLDSALLRPGRFD 412

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4908	NP_609358.1	BCS1_N	23..192	CDD:214980
		RecA-like_BCS1	202..354	CDD:410918	53/152 (35%)
VAR1	NP_568604.1	FtsH_fam	192..694	CDD:273520	53/152 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0465
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810