DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and AT5G17740

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_197276.1 Gene:AT5G17740 / 831642 AraportID:AT5G17740 Length:533 Species:Arabidopsis thaliana


Alignment Length:338 Identity:101/338 - (29%)
Similarity:160/338 - (47%) Gaps:53/338 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 QNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERTREQQTLDLHMGVPWETVTLTAFGNNKGIYFD 150
            :|.|.|:...|      |:   .|:|| ||      :::|:|........:.:.:       |..
plant   130 RNKNNTMVEEY------GQ---SYQGN-IQ------RESLELSFDKKHRDLVVNS-------YIP 171

  Fly   151 ILEEARQLALEATEGKTVL----YTAMGAEWRP--FGHPRRRRPTGSVVLDRGTSQRIIADCQDF 209
            .:|..   |.|....:.:|    |:.|...|:.  |.||   ....::.::....:.:|.|...|
plant   172 YVESK---AKEVNNKRRILKMHCYSHMAQTWQSVNFKHP---STFDTMAMNDDLKRSMIEDLDRF 230

  Fly   210 IKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNL-SERGLTDDRLNHLLNV 273
            :....:|.:.|..::||||||||||.||||.:.|:|..|::.:..|.| |.:|  |..|..||..
plant   231 VGRKDFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDIYDLQLASVQG--DAHLRSLLLA 293

  Fly   274 APEQSIILLEDIDAA--FVSREATPQQKS----AFDGLNRITFSGLLNCLDGVGST--EARIVFM 330
            ....||:|:||||.:  ..:|...|.:.|    |......:|.||||||:||:.|:  ..||:..
plant   294 TNNSSILLIEDIDCSVDLPTRLQPPTETSQPLGAVQVSKPLTLSGLLNCIDGLWSSCGNERIIIF 358

  Fly   331 TTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNFFASSDTTK-----AEEFGKRVNSFGR 390
            |||..::|||||:||||:|:..|:|:|:....:.:..|:...||...     ..:....::  |.
plant   359 TTNNKEKLDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLSDENDDTHPLCPDIKHLID--GH 421

  Fly   391 SASPAQIQGFFMK 403
            ..:|||:....||
plant   422 VLTPAQVAEELMK 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 23/111 (21%)
RecA-like_BCS1 202..354 CDD:410918 66/160 (41%)
AT5G17740NP_197276.1 AAA_assoc 35..127 CDD:291061
AAA 245..383 CDD:214640 62/139 (45%)
AAA 248..383 CDD:278434 60/136 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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