DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and AT5G17730

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_197275.1 Gene:AT5G17730 / 831641 AraportID:AT5G17730 Length:470 Species:Arabidopsis thaliana


Alignment Length:433 Identity:112/433 - (25%)
Similarity:189/433 - (43%) Gaps:70/433 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LQGGVILFRRHCMITLEVPCRDKSYQWLLKWITIRGARKTQHLSVETNFVQNDNGTIKTSYDFIP 100
            |.|.|::.:....:|:..|.::....:|..:  :.....|..|.::.:.   .||.....|....
plant    20 LTGYVMMIKPFLEMTIPPPLQNYMISYLNSF--LHSTPSTLTLIIDDHI---KNGMYNELYGAAQ 79

  Fly   101 SIGKHLFQYKGNWIQVERTREQQTLDLHMGVPWETVTLTAFG----------NNK-------GIY 148
            ........:....:::.|.|.::.:::|..| .|.|:....|          :||       |.:
plant    80 VYISTKVNHNAERLRISRDRSEKNVNIHFSV-GEVVSDIYQGIEVKWRFCVDSNKSNMVHYFGEH 143

  Fly   149 FDIL--EEARQLALEATEGKTVL-------------------------YTAMGAEWRPFG--HPR 184
            |.:.  .|..:|:.|....:.||                         |..|..:|:...  || 
plant   144 FKLNPDRECVELSFEKKHTELVLNSYIPYVESKAKVINNERKILKMYSYCCMYLKWQSVNLEHP- 207

  Fly   185 RRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELE 249
              ....::.::....:.::.|...||:...:|.:.|.|::||||||||||.||:|.:.|:|..|:
plant   208 --STFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIANYLK 270

  Fly   250 YSVCLLNL-SERGLTDDRLNHLLNVAPEQSIILLEDIDAAFVSREATPQQKSAFD--GLNRITFS 311
            :.:..|.| |.|  .|..|..||......||:|:||||.| |......|.|:..|  |.:.:|.|
plant   271 FDIYDLQLASVR--EDADLRRLLLGTTNSSILLVEDIDCA-VDLHTRLQPKTQDDTKGSSMLTLS 332

  Fly   312 GLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNFFASSD 374
            |||.|:||:.|:  :.|||..||.:.:||||||:||||:|:..::|:|.....:.:..|:...|.
plant   333 GLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHMGHCCFDVFKTLASNYLGLSH 397

  Fly   375 TTKAE---EFGKRVNSFGRSASPAQIQGFFMKHKLSSPQTVID 414
            .....   |..:.:.  |...:|||:....||::  .|...::
plant   398 DDPHHLYPEIERLIK--GEVLTPAQVAEELMKNE--DPDVALE 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 32/201 (16%)
RecA-like_BCS1 202..354 CDD:410918 68/156 (44%)
AT5G17730NP_197275.1 AAA_assoc 35..129 CDD:291061 14/99 (14%)
P-loop_NTPase 217..>266 CDD:304359 20/48 (42%)
AAA 245..378 CDD:214640 62/135 (46%)
AAA 248..378 CDD:278434 60/132 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.930

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