DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and AT4G30250

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001328009.1 Gene:AT4G30250 / 829148 AraportID:AT4G30250 Length:521 Species:Arabidopsis thaliana


Alignment Length:407 Identity:107/407 - (26%)
Similarity:182/407 - (44%) Gaps:67/407 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 SVETN-FVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERTREQQTLDLHMGVP--WETVT--- 137
            ||..| .|.:.|...:.|...:|:.....|....|         .:..|:..||.  ||.|.   
plant    77 SVTVNDAVSSSNNNTRLSLTRVPNSSSVTFGLSNN---------DRITDVFNGVTILWEHVVVQR 132

  Fly   138 -LTAFG------NNKGIYFDILEEARQLALEA----TEGKT----------VLYT-----AMGAE 176
             :.:|.      ..:|....|.:..:.|.|::    ..||:          :|||     ::.|.
plant   133 QVQSFSWRPMPEEKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRRNEERLLYTNSRGVSLDAR 197

  Fly   177 WRPFGHPRRRRPT--GSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSS 239
            ..|:...|.:.|:  .::.:|....:||:.|.::|.....:|.:.|..::||||||||||.||||
plant   198 SHPWDSVRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGFYQKTGRAWKRGYLLYGPPGTGKSS 262

  Fly   240 FITALAGELEYSVCLLNLSERGLTDDRLNHLLNVAPEQSIILLEDIDA--AFVSREATPQQKSAF 302
            .|.|:|..|.|.:..|.|:| ...:..|..||.....:|||::||||.  :...|....::..::
plant   263 LIAAMANYLGYDIYDLELTE-VQNNSELRKLLMKTSSKSIIVIEDIDCSISLTKRGKNKKKNGSY 326

  Fly   303 D---------GL----NRITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKE 352
            :         ||    :.:|.|||||..||:.|.  ..:|...|||:|::||.||:|.||:|:..
plant   327 EYDPGLTNGSGLEEPGSSVTLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDSALMRSGRMDMHV 391

  Fly   353 YIGYCTQYQLEEMFKNFF----ASSDTTKAEEFGKRVNSFGRSASPAQIQGFFMKHKLSSPQTVI 413
            ::|:|....|:.:.||:.    ...|:...:|..:.|..  ...:||.:....::::..:.:.|.
plant   392 HMGFCKFPALKILLKNYLRLEEEDMDSVVLKEMEECVEE--AEITPADVSEVLIRNRSDAEKAVR 454

  Fly   414 DSCEDIWENVLDHNKKI 430
            :....:.|.|:...|.:
plant   455 EIVSVLKERVVKRRKSV 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 29/146 (20%)
RecA-like_BCS1 202..354 CDD:410918 62/168 (37%)
AT4G30250NP_001328009.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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