DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and AT4G25835

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_567730.1 Gene:AT4G25835 / 828689 AraportID:AT4G25835 Length:506 Species:Arabidopsis thaliana


Alignment Length:416 Identity:114/416 - (27%)
Similarity:189/416 - (45%) Gaps:74/416 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 WLLKWITIRGARKTQHLSVETN---FVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERTREQQ 123
            :|...::|.|.|.:...:|.::   |..::|.:|..:::.:..:          |..:...|:.|
plant    71 YLSSSVSIAGNRLSLTRAVNSSSVTFGLSNNDSIVDTFNSVTVV----------WEHIVTQRQTQ 125

  Fly   124 TLDLHMGVPWETV-------TLTAFGNNKGIYFD-----ILEEARQLALEATEGKTVLYT----- 171
            |.      .|..:       ||.....:|.:..|     |:|:|.:  :.......:|||     
plant   126 TF------AWRPMPEEKRGFTLRIKKKDKNLILDSYLDYIMEKANE--IRRLNQDRLLYTNSRGG 182

  Fly   172 ---AMGAEWR--PFGHPRRRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYG 231
               :.|..|.  ||.||   ....::.:|....|:|:.|.:||.:...:|.:.|..::|||||||
plant   183 SLDSRGLPWESVPFKHP---STFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGYLLYG 244

  Fly   232 PPGCGKSSFITALAGELEYSVCLLNLSERGLTDDRLNHLLNVAPEQSIILLEDIDAAFVSREATP 296
            |||.||||.|.|:|..|.|.:..|.|:| ..::..|..||.....:|||::||||.:........
plant   245 PPGTGKSSMIAAMANYLRYDIYDLELTE-VKSNSELRKLLMKTSSKSIIVIEDIDCSINLTNRNK 308

  Fly   297 QQKSAF-----------------DGLNRITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPAL 342
            :|.:..                 || |.||.|||||..||:.|.  ..||...|||:|::|||||
plant   309 KQSTGSYNEPEMLTGSGLGDDLGDG-NTITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPAL 372

  Fly   343 VRPGRIDLKEYIGYCTQYQLEEMFKNF--FASSDTTKA--EEFGKRVNSFGRSASPAQIQGFFMK 403
            :|.||:|:..::.|||...::.:.:|:  |...|....  :|..:.|:.  ...:||.:....:|
plant   373 LRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKELAEVVDR--AEITPADVSEALIK 435

  Fly   404 HKLSSPQTVIDSCEDIWENVLDHNKK 429
            ::....:.|.:...|:...| :.|:|
plant   436 NRRDKERAVRELLVDLRSRV-ERNEK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 29/154 (19%)
RecA-like_BCS1 202..354 CDD:410918 67/170 (39%)
AT4G25835NP_567730.1 AAA_assoc 26..119 CDD:291061 9/57 (16%)
P-loop_NTPase <178..>296 CDD:304359 42/121 (35%)
AAA 237..384 CDD:214640 61/148 (41%)
AAA 240..386 CDD:278434 59/147 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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