DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and AT3G50940

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_190663.2 Gene:AT3G50940 / 824258 AraportID:AT3G50940 Length:451 Species:Arabidopsis thaliana


Alignment Length:386 Identity:102/386 - (26%)
Similarity:173/386 - (44%) Gaps:89/386 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LKWITI---------RGAR------KTQHLSVETNFVQNDNGTIKTSYDFIPSIGKHLFQYKGNW 113
            |.||.:         |..|      |::..|.|.:|.:.....:..||  :|.:.:.....|   
plant   124 LSWILVCRHVDKKDFRNPRDLNSTLKSEVRSYELSFRKKFKNMVLESY--LPFVVEQAASIK--- 183

  Fly   114 IQVERTREQQTLDLHMGVPWETVTLTAFGNNKGIYFDILEEARQLALEATEGKTVLYTAMGAEWR 178
             |..:|.:..|:|.: .|.|.:|||                                        
plant   184 -QKFKTLKIFTVDSY-SVEWTSVTL---------------------------------------- 206

  Fly   179 PFGHPRRRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITA 243
              .||...|   ::.||....:.::.|...|::...:|.:.|..::||||||||||.||||.|.|
plant   207 --DHPSTFR---TLALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAA 266

  Fly   244 LAGELEYSVCLLNLSERGLTDDRLNHLLNVAPEQSIILLEDIDAAFVSREATPQQKSAFDGLNR- 307
            :|..|.:.:..|:|:... .:..|..||.....:||:::||||.:...::.:..|::. |.|:: 
plant   267 IANHLNFDIYDLDLTSLN-NNAELRRLLMSTANRSILVVEDIDCSIELKDRSTDQENN-DPLHKT 329

  Fly   308 ITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNFF 370
            :|.|||||.:||:.|:  ..||:..||||.::|||||:||||:|:..::.|||....:.:..|:.
plant   330 VTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHIHMSYCTPAAFKVLASNYL 394

  Fly   371 ASSD---TTKAEEFGKRVNSFGRSASPAQIQGFFMKHKLSSPQTVIDSCEDIWENVLDHNK 428
            ...|   ..:.|||.:.:     ..:||::....|:.         ||.:.:.:.:::..|
plant   395 EIQDHILFEQIEEFIREI-----EVTPAEVAEQLMRS---------DSVDKVLQGLVEFLK 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 25/142 (18%)
RecA-like_BCS1 202..354 CDD:410918 61/154 (40%)
AT3G50940NP_190663.2 AAA_assoc 38..130 CDD:291061 3/5 (60%)
AAA 247..378 CDD:214640 57/132 (43%)
AAA 250..380 CDD:278434 55/131 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 1 0.900 - - OOG6_101424
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.830

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