DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and AT3G28600

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_189501.2 Gene:AT3G28600 / 822490 AraportID:AT3G28600 Length:477 Species:Arabidopsis thaliana


Alignment Length:461 Identity:126/461 - (27%)
Similarity:200/461 - (43%) Gaps:103/461 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LFRRHCMITLEVPCRDKSYQWLLKWITIRGARKTQHLS----------VETNFVQNDNGTIKTSY 96
            :|..|..|.::        ::|:.  ||:.....|..|          ||.:|.|.::.....::
plant    24 IFPNHLRIAIK--------EFLIS--TIQQLSFVQRFSDRFINFFSPYVEISFSQYEDYQFNHAF 78

  Fly    97 DFIPSI--------GKHL--FQYKGNWIQVERTREQQTLDLHMG--VPWE---------TVTLTA 140
            ..|.:.        .|||  .|.|.:...|.:..|.:..|.:.|  |.||         |..||.
plant    79 AAIETYLGAKATDKAKHLRASQVKESKGLVLKRDETKVRDEYEGGTVWWEMETDSTGYRTFKLTF 143

  Fly   141 FGNNKGIYFD-----ILEEARQLALEATEGKTVLY---------TAMGAEWR--PFGHPRRRRPT 189
            ...::.|..|     :.||.:.:..::.:.|  |:         |:..:.||  .|.||....  
plant   144 HRRSRDIVTDSYIKYVFEEGKSIQAKSKQMK--LFTNNPSSHWGTSKKSFWRYIDFEHPASFH-- 204

  Fly   190 GSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCL 254
             ::.:|....:.|:.|...|.....:|.:.|..::|||||:||||.|||:.|.|:|..|.||:..
plant   205 -TLAMDTKKKEEILNDLAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYD 268

  Fly   255 LNLSERGLTDDRLNHLLNVAPEQSIILLEDIDAA-------------FVSRE----ATPQQKSAF 302
            |.|:.. ..:..|..||.....:|||::||||.:             ..|||    .|.:.||. 
plant   269 LELTAI-RNNSELRKLLTATSSKSIIVIEDIDCSLDLTGKRKKEKNLMTSREDGEQGTEEDKSF- 331

  Fly   303 DGLNRITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEM 365
                 :|.|||||.:||:.|.  :.||:..|||:.::|||||:|.||:|:...:.||:....:.:
plant   332 -----VTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHIELSYCSFEAFKIL 391

  Fly   366 FKNFFASSDTTKAEEFGKRVNSFGRSA--SPAQIQGFFMKHKLSSPQTVID---SCEDIWENVLD 425
            .||:. ..||   ....|::.|..:..  :||.:....||     ..|.||   |.:|:.: .|:
plant   392 AKNYL-DLDT---HPLFKKIESLLKETKIAPADVAENLMK-----KNTEIDADGSLKDLIQ-ALE 446

  Fly   426 HNKKIN 431
            ..|||:
plant   447 GKKKIH 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 40/196 (20%)
RecA-like_BCS1 202..354 CDD:410918 64/170 (38%)
AT3G28600NP_189501.2 AAA_assoc 25..129 CDD:291061 24/113 (21%)
AAA 238..380 CDD:214640 59/148 (40%)
AAA 241..382 CDD:278434 57/147 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 1 0.900 - - OOG6_101424
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.870

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