DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and AT3G28570

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001327276.1 Gene:AT3G28570 / 822487 AraportID:AT3G28570 Length:458 Species:Arabidopsis thaliana


Alignment Length:322 Identity:90/322 - (27%)
Similarity:154/322 - (47%) Gaps:50/322 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IRGARKTQHLSVETNFVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERT---REQQTLDLHMG 130
            ::|.:..:::|::   ::.|:..|:..|:.:..           |.::.|.   ::...|..|..
plant   101 LKGNQVKENMSLD---LKRDDVKIEEEYEGVKM-----------WWEIFRCVKGKKICRLTFHRS 151

  Fly   131 VPWETVTLTAFGNNKGIYFD-ILEEARQLALEATEGKTVLY---------TAMGAEW--RPFGHP 183
             .|:.||        |.|.. ::||.:  :::|.:.|.::.         |:|...|  ..|.||
plant   152 -NWDVVT--------GSYLRYVVEEGK--SIKARKKKVMVLMNNPSLNWKTSMKGLWTCTEFEHP 205

  Fly   184 RRRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGEL 248
               ....::.:|......|..|...|.....:|.:.|..::||||||||||.|||:.|.|:|..:
plant   206 ---ATFDTLAMDIDKKDEIFRDLVAFRDGKEYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMANLM 267

  Fly   249 EYSVCLLNLSERGLTDDRLNHLLNVAPEQSIILLEDIDAA--FVSREATPQQKSAFDG--LNRIT 309
            :|::..|.|:..| .:..|..||.....:|||::||||.:  ..........|...:|  .|.:|
plant   268 KYNIYDLELTSIG-NNWELKKLLIATTNKSIIVIEDIDCSLDLTGEREVKDLKGDKEGKKSNAVT 331

  Fly   310 FSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNF 369
            .|||||.:||:.|.  :.||:..|||::.:||.||:|.||:|:...:.|||....:.:.||:
plant   332 LSGLLNFIDGIWSACGQERILVFTTNHVGKLDQALIRRGRMDMHIELSYCTFGAFKILAKNY 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 24/137 (18%)
RecA-like_BCS1 202..354 CDD:410918 60/157 (38%)
AT3G28570NP_001327276.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 1 0.900 - - OOG6_101424
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.870

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