DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and AT3G28510

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_189492.1 Gene:AT3G28510 / 822481 AraportID:AT3G28510 Length:530 Species:Arabidopsis thaliana


Alignment Length:463 Identity:120/463 - (25%)
Similarity:192/463 - (41%) Gaps:115/463 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VPCRDKSY---------QWLLKWITIR-------GARKTQHLSVETNFVQNDNGTI--------- 92
            ||...::|         .|:..::.|:       |.:::|......|::.:.:..:         
plant    29 VPAHFRAYVERYFHKMIGWISYYVDIKFTEYTDEGLKRSQAYDSIRNYLASKSTALAKRLKANET 93

  Fly    93 KTSYDFIPSIGKH-------------------LFQYKGNWIQVERTREQQ---TLDL---HMGVP 132
            |.|...:.|:..|                   :.|.:.|:.|  |:.|::   ||..   |.|:.
plant    94 KNSKSLVFSMDDHEEIEDEFEGVKVKWYSNVKVIQPQSNYGQ--RSSEERRHFTLSFHRRHRGMI 156

  Fly   133 WETVTLTAFGNNKGIYFD-ILEEARQLALEATEGKTVLYTAMGAE----WR-------PFGHPRR 185
            .||            |.| :|.|.:.:.|...|.|  |||...::    ||       ||.||..
plant   157 IET------------YLDHVLREGKAIGLMNRERK--LYTNNSSQEWYPWRSGKWSNVPFHHPAT 207

  Fly   186 RRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEY 250
            ..   ::.:|....:.|..|...|.|...:|.:.|.|::|||||:||||.|||:.|.|:|..|:|
plant   208 FE---TLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIANFLDY 269

  Fly   251 SVCLLNLSERGLTDD-RLNHLLNVAPEQSIILLEDIDAAFVSREATPQQK--------------- 299
            .|..|.|:.  :.|: .|..||.....:|||::||||.   |.:.|.|:|               
plant   270 DVYDLELTT--VKDNSELKKLLLDTTSKSIIVIEDIDC---SLDLTGQRKKKKEEDEEEDGEEKK 329

  Fly   300 ------SAFDGLNRITFSGLLNCLDGVGS--TEARIVFMTTNYIDRLDPALVRPGRIDLKEYIGY 356
                  ...|..:::|.|||||.:||:.|  :..:|:..|||::|:|||||:|.||:|....:.|
plant   330 EGEKKPKVDDKQSKVTLSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPALIRRGRMDNHIEMSY 394

  Fly   357 CTQYQLEEMFKNFFASSDTTKAEEFGKRVNSFGRSASPAQIQGFFMKHKLSSPQTVIDSCEDIWE 421
            |.....:.:.||:..........|..:::..  ...|||.:....|.   .|.:...|.|.....
plant   395 CKFEAFKVLAKNYLEIETHDLYGEIERKLEE--TDMSPADVAETLMP---KSDEEDADICIKRLV 454

  Fly   422 NVLDHNKK 429
            ..|:..|:
plant   455 KTLEEEKE 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 39/200 (20%)
RecA-like_BCS1 202..354 CDD:410918 66/175 (38%)
AT3G28510NP_189492.1 AAA_assoc 29..124 CDD:291061 12/94 (13%)
AAA 243..392 CDD:214640 59/153 (39%)
AAA 246..394 CDD:278434 57/152 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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