DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and AT2G46620

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_182185.2 Gene:AT2G46620 / 819274 AraportID:AT2G46620 Length:491 Species:Arabidopsis thaliana


Alignment Length:443 Identity:112/443 - (25%)
Similarity:185/443 - (41%) Gaps:92/443 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FGLFGVGAAAAILRKGLQGGVILFRR------HCMITLEVPCRDKSYQWLLKWITIRGARKTQHL 78
            |.||.|  ...:.:.||...|.|:||      |.....:||..:.:.|             ..||
plant    16 FALFLV--RILLFKTGLIYMVKLWRRKIIDWFHVYQFYKVPEFNDNVQ-------------ENHL 65

  Fly    79 SVETNFVQNDNGTIKTSYDFIPSIGKHLFQ-YKGNWIQVERTREQQTLDLHMG--VPW------- 133
            ..:.....|...:|:.| ||     .:||. .|.|.|.:...|.|...|..:|  |.|       
plant    66 YQKVYMYLNSLSSIENS-DF-----TNLFTGKKSNEIILRLDRNQVVGDEFLGARVCWINGEDED 124

  Fly   134 ---ETVTLTAFGNNKGIYFDILEEARQLA--LEATEGKTVLYTAMGAE------------WR--P 179
               ..|......:.:.|....|:....::  ||....:..|:..:|.:            ||  |
plant   125 GARNFVLKIRKADKRRILGSYLQHIHTVSDELEQRNTELKLFINVGIDDHLNKKKKKNGRWRSIP 189

  Fly   180 FGHPRRRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITAL 244
            |.||   ....::.::.....::.:|.:.|:|...:|.:.|..::|.||||||.|.|||||:.|:
plant   190 FDHP---CTFDNIAMETDLKNKVKSDLESFLKGKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAM 251

  Fly   245 AGELEYSVCLLNLSERGLTDDRLNHLLNVAPEQSIILLEDIDAAFVSREATPQQKSAFDGLNRIT 309
            |..|:|.|..::|| :.:.|..|..||.....:|:|::||:| ..:|.::|           .:.
plant   252 ANFLDYDVYDIDLS-KVVDDSDLKMLLLQTRGKSVIVIEDLD-RHLSTKST-----------AVN 303

  Fly   310 FSGLLNCLDGVGST---EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNFFA 371
            .||:||..|.:.|:   :.||:..|....:::|||::||||:|:..:...|.....:.:..|:..
plant   304 LSGILNFTDSILSSCTADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDFTAFKTLANNYLG 368

  Fly   372 SSDTTKAEEFGKRVNSF---GRSASPAQIQGFF----------MKHKLSSPQT 411
                .|..:...:|...   |.|.|||:|....          :||.:::.||
plant   369 ----VKEHKLFSQVEGIFQNGASLSPAEIGELMIANRNSPTRALKHVINALQT 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 43/203 (21%)
RecA-like_BCS1 202..354 CDD:410918 53/154 (34%)
AT2G46620NP_182185.2 AAA_assoc 39..118 CDD:405113 22/97 (23%)
P-loop_NTPase 133..>253 CDD:422963 31/122 (25%)
RecA-like_BCS1 209..351 CDD:410918 53/154 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.970

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