DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4908 and AT2G18193

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_849972.1 Gene:AT2G18193 / 816333 AraportID:AT2G18193 Length:495 Species:Arabidopsis thaliana


Alignment Length:416 Identity:123/416 - (29%)
Similarity:191/416 - (45%) Gaps:73/416 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LQGGVILFRRHCMITLEVPCRDKSY--QWLLKWITIRGARKTQHLSV--ETNFVQNDNGTIKTSY 96
            |.|.::|||  .|:...||.:.:||  ..|.::.|    .|:::|:|  :.||..|.|.....:.
plant    21 LTGFLMLFR--SMLHDFVPEKLRSYFSSLLDRFFT----PKSKYLTVIIDENFGLNRNQVFDAAE 79

  Fly    97 DFIPS----------IGKHLFQYKGNWIQVERTREQQTLDLHMGVPWETVTLTAFGNNKG----I 147
            .::.|          :|| :.:.|...|.:||..|.........|.|..|...   |.||    .
plant    80 MYLRSKIGPETERLRVGK-IPKQKHFTISIERGEEILDTFEESEVKWSYVQSE---NEKGDKVKR 140

  Fly   148 YFDILEEAR-----------QLALEATEGK-----TVLYT-----------AMGAEWRPFG--HP 183
            |:::..|.:           .:..|:.|.|     ..||:           ..|..|....  ||
plant   141 YYELTFEKKLRDKVLNSYLTHVVAESEEIKRNLRVVKLYSRDVYASDDDDGMAGGNWGCINLEHP 205

  Fly   184 RRRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGEL 248
               ....::.:|....::||.|.:.|:|...:|.:.|..::||||||||||.||||.|.|:|..|
plant   206 ---STFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 267

  Fly   249 EYSVCLLNLSERGLTDD-RLNHLLNVAPEQSIILLEDID--AAFVSREATPQQKSAFDGLNRITF 310
            ::.|..|.||  .:.|: .|..:|.....:||:::||||  |....|||..|:.....|  ::|.
plant   268 KFDVFDLELS--SIYDNGELKRVLLSTTNRSILVIEDIDCNAEVRDREAENQEDEQIKG--KVTL 328

  Fly   311 SGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNFFASS 373
            ||:||.:||:.|:  :.||:..|||:.:||||||:||||:|:...:.|||......:..|:....
plant   329 SGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSYCTGLGFRTLVSNYLGLD 393

  Fly   374 DTTK--AEEFGKRVNSFGRSASPAQI 397
            ....  .||....|:|  ...:||::
plant   394 GLNHPLCEEIEALVDS--TEVTPAEL 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 44/202 (22%)
RecA-like_BCS1 202..354 CDD:410918 68/156 (44%)
AT2G18193NP_849972.1 AAA_assoc 36..128 CDD:291061 23/96 (24%)
P-loop_NTPase 218..>265 CDD:304359 23/46 (50%)
AAA 243..374 CDD:214640 61/134 (46%)
AAA 246..376 CDD:278434 59/133 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.970

Return to query results.
Submit another query.