DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4908 and AT2G18190

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_179411.2 Gene:AT2G18190 / 816332 AraportID:AT2G18190 Length:494 Species:Arabidopsis thaliana


Alignment Length:463 Identity:126/463 - (27%)
Similarity:194/463 - (41%) Gaps:105/463 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LQGGVILFRRHCMITLEVPCRDKSY--QWLLKWIT------------IRGARKTQHLSVETNFVQ 86
            |.|.::|||  .:...|||.|.:||  ..|.::.|            |.|.::.|.......:::
plant    22 LTGFLMLFR--SLFNDEVPERLRSYITDLLNRFFTPKSKNLTMVIDEIIGFKRNQVFDAAEVYLR 84

  Fly    87 NDNG--TIKTSYDFIPSIGKHLFQY--KG------------NWIQVERTREQQTLDLHMGVPWET 135
            |..|  |.:.....:|. .||...|  ||            .|..||...|....:..       
plant    85 NKIGPETARLRVGKLPK-QKHFTIYIEKGEEILDTFENSELRWTYVESENEASQKEKR------- 141

  Fly   136 VTLTAFGNNKGIYFDILEEAR-----------QLALEATEGK-----TVLYT-----------AM 173
                        |:::..|.:           .:..|:.|.|     ..||:           ..
plant   142 ------------YYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRAVKLYSRDVRASKDDDGMA 194

  Fly   174 GAEWRPFG--HPRRRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCG 236
            ||.|....  ||....   ::.:|.|..::||.|.:.|:|...:|.:.|..::||||||||||.|
plant   195 GAGWGCINLEHPSTFE---TLAMDPGAKKKIIDDMERFLKRREFYKRVGKAWKRGYLLYGPPGTG 256

  Fly   237 KSSFITALAGELEYSVCLLNLSERGLTDDRLNHLLNVAPEQSIILLEDID---AAFVSREATPQQ 298
            |||.|.|:|..|::.|..|.||.. ..:.:|..:|.....:||:::||||   |..|.|||...|
plant   257 KSSLIAAMANYLKFDVFDLELSSI-YENAQLKSILLSTTNRSILVIEDIDCSSAEVVDREADEYQ 320

  Fly   299 KSAFDGLNRITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQ 361
            :.......|:|.|||||.:||:.|:  :.||:..|||:.:||||||:||||:|:...:.|||...
plant   321 EYEEGYYGRVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSYCTGLG 385

  Fly   362 LEEMFKNFFASSDTTK--AEEFGKRVNSFGRSASPAQIQGFFMKHKLSSPQTVIDSCEDIWENVL 424
            ...:..|:........  .||....::|  ...:||::....|:.         |..:.:...|:
plant   386 FRTLVSNYLGLGGLNHPLCEEIEALIDS--TEVTPAELAEELMQE---------DDTDVVLRGVV 439

  Fly   425 D--HNKKI 430
            .  .|:|:
plant   440 SFVENRKV 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 41/214 (19%)
RecA-like_BCS1 202..354 CDD:410918 69/156 (44%)
AT2G18190NP_179411.2 AAA_assoc 37..130 CDD:291061 20/93 (22%)
P-loop_NTPase 219..>266 CDD:304359 23/46 (50%)
AAA 244..378 CDD:214640 62/134 (46%)
AAA 247..380 CDD:278434 60/133 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 98 1.000 Domainoid score I2399
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1900
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532729at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2395
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.970

Return to query results.
Submit another query.