DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and Afg3l2

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_081406.1 Gene:Afg3l2 / 69597 MGIID:1916847 Length:802 Species:Mus musculus


Alignment Length:365 Identity:87/365 - (23%)
Similarity:141/365 - (38%) Gaps:84/365 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EVPCRDKSYQWLLKWITIRGARKTQHLSVETNFVQNDNGTIKTSYDFI----------------- 99
            :.|..||.::....|..:...      .|...||...:|...|..||:                 
Mouse   134 DFPWDDKDFRMYFLWTALFWG------GVMIYFVFKSSGREITWKDFVNNYLSKGVVDRLEVVNK 192

  Fly   100 ------------PSIGKHLFQYKGNWIQVERTREQQTLDLHMGVPWET-VTLTAFGNNKGIY-FD 150
                        |..|::::...|:....||..|  ||...:|:..|. |.:.....:.|.: ..
Mouse   193 RFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLE--TLQQELGIEGENRVPVVYIAESDGSFLLS 255

  Fly   151 ILEEARQLALEATEGKTVLYTAMGAEWRPFGHPRRRRPTGSVVLDRGTSQRIIAD---------- 205
            :|.....:|.       :|||....   |.|..|..|..|.:.....|:.:::.|          
Mouse   256 MLPTVLIIAF-------LLYTIRRG---PAGIGRTGRGMGGLFSVGETTAKVLKDEIDVKFKDVA 310

  Fly   206 -CQD----------FIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNLSE 259
             |::          |:|:...|...|....:|.:|.||||.||:....|.|||.......::.||
Mouse   311 GCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSE 375

  Fly   260 -----RGLTDDRLNHLLNVAPEQS--IILLEDIDAAFVSREATPQQKSAFDGLN--RITFSGLLN 315
                 .|:...|:..|..:|.:.:  |:.:::|||  |.|:   :.:..|.|.:  ..|.:.||.
Mouse   376 FLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA--VGRK---RGRGNFGGQSEQENTLNQLLV 435

  Fly   316 CLDGVGSTEARIVFMTTNYIDRLDPALVRPGRIDLKEYIG 355
            .:||..:|...::...||..|.|||||:||||.|.:.:||
Mouse   436 EMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIG 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 33/170 (19%)
RecA-like_BCS1 202..354 CDD:410918 51/181 (28%)
Afg3l2NP_081406.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..124
FtsH_ext 145..241 CDD:284011 18/103 (17%)
FtsH_fam 252..745 CDD:273520 64/239 (27%)
AAA 344..475 CDD:278434 44/135 (33%)
Peptidase_M41 561..743 CDD:279742
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 759..802
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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