DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and Bcs1l

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001007667.1 Gene:Bcs1l / 301514 RGDID:1359658 Length:418 Species:Rattus norvegicus


Alignment Length:419 Identity:253/419 - (60%)
Similarity:321/419 - (76%) Gaps:2/419 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTLPDLVAGLSSNPYFGAGFGLFGVGAAAAILRKGLQGGVILFRRHCMITLEVPCRDKSYQWLLK 65
            |...|.|..|..||||||||||.|||.|.|:.|||.|.|::.||||.|||||||.||:||.|||.
  Rat     1 MPFTDFVLALKDNPYFGAGFGLVGVGTALAMARKGAQLGLVAFRRHYMITLEVPARDRSYAWLLS 65

  Fly    66 WITIRGARKTQHLSVETNFVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERTREQQTLDLHMG 130
            |:| |.:.:||||||||:::|:::|.|.|.::||||.|.|...|:|.||:|||.||.|.:||..|
  Rat    66 WLT-RHSTRTQHLSVETSYLQHESGRISTKFEFIPSPGNHFIWYQGKWIRVERNREMQMVDLQTG 129

  Fly   131 VPWETVTLTAFGNNKGIYFDILEEARQLALEATEGKTVLYTAMGAEWRPFGHPRRRRPTGSVVLD 195
            .|||:||.||.|.::.::|:||||||.|||:..|||||:|||:|:|||.||:||||||..||||.
  Rat   130 TPWESVTFTALGTDRKVFFNILEEARALALQQEEGKTVMYTAVGSEWRTFGYPRRRRPLDSVVLQ 194

  Fly   196 RGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNLSER 260
            :|.:.||:.|.::||.:..||..|||||||||||||||||||||||||||||||:|:|||:|::.
  Rat   195 QGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDS 259

  Fly   261 GLTDDRLNHLLNVAPEQSIILLEDIDAAFVSREATPQQKSAFDGLNRITFSGLLNCLDGVGSTEA 325
            .|:||||||||:|||:||::||||:||||:||:...:....:.||.|:|||||||.||||.||||
  Rat   260 SLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEA 324

  Fly   326 RIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNFFASSDTTKAEEFGKRVNSFGR 390
            ||||||||:||||||||:||||:|||||:|||:.:||.:||:.|:.....:.||.|.:.|.....
  Rat   325 RIVFMTTNHIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKATS 389

  Fly   391 SASPAQIQGFFMKHKLSSPQTVIDSCEDI 419
            ..||||:||:||.:| :.|...|.:.|.:
  Rat   390 QISPAQVQGYFMLYK-NDPMGAIHNVESL 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 100/168 (60%)
RecA-like_BCS1 202..354 CDD:410918 108/151 (72%)
Bcs1lNP_001007667.1 BCS1_N 24..191 CDD:214980 100/167 (60%)
RecA-like_BCS1 201..353 CDD:410918 108/151 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349081
Domainoid 1 1.000 218 1.000 Domainoid score I2590
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3193
Inparanoid 1 1.050 533 1.000 Inparanoid score I1168
OMA 1 1.010 - - QHG53752
OrthoDB 1 1.010 - - D365561at33208
OrthoFinder 1 1.000 - - FOG0005110
OrthoInspector 1 1.000 - - oto98199
orthoMCL 1 0.900 - - OOG6_101424
Panther 1 1.100 - - LDO PTHR23070
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X279
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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