DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and yta12

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_596797.1 Gene:yta12 / 2541079 PomBaseID:SPBC543.09 Length:773 Species:Schizosaccharomyces pombe


Alignment Length:335 Identity:88/335 - (26%)
Similarity:133/335 - (39%) Gaps:70/335 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EVPCRDKSYQWLLKWITIRGARKTQHLSVETNFVQNDN--------GTIKTSYDFIPSIGK-HLF 107
            |:..:|...|:|.|.:            ||...|.|.|        |....|..:..|||. ..|
pombe   158 EITWQDFRQQFLDKGL------------VERLVVVNRNMVRVILRGGVASGSGQYYFSIGSIDSF 210

  Fly   108 QYKGNWIQVERTREQQTLDLHMGVPWETVTLTAFGNNKGIYFDILEEARQLALEATEGKTVLY-- 170
            ..|     :|..:.|      :|:|.......|:.:...:...:|..|..|.:..    :|:|  
pombe   211 DRK-----LEDAQRQ------LGIPPSEFVPVAYHDEVSVLATLLSFAPTLLIIG----SVIYLS 260

  Fly   171 -----TAMGAEWRPFGHPRRRRPTGSVVLDRGTSQRI--------------IADCQDFIKSSLWY 216
                 .|.|.:...||..:.|    :.:.:..|..:|              |.:...|:|:..:|
pombe   261 RRASGAAGGGQGGIFGIGKSR----AKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFY 321

  Fly   217 TQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNLSE-----RGLTDDRLNHLLNVAPE 276
            .:.|....||.:|.||||.||:....|.|||.......::.||     .|:...|:..|...|.:
pombe   322 ERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARK 386

  Fly   277 QS--IILLEDIDAAFVSREATPQQKSAFDGLNRITFSGLLNCLDGVGSTEARIVFMTTNYIDRLD 339
            .:  ||.:::|||...:|....|..|  :.....|.:.||..:||..|:|..:||..||..|.||
pombe   387 NAPCIIFIDEIDAIGKARGRGGQFGS--NDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLD 449

  Fly   340 PALVRPGRID 349
            |||:||||.|
pombe   450 PALLRPGRFD 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 32/155 (21%)
RecA-like_BCS1 202..354 CDD:410918 55/169 (33%)
yta12NP_596797.1 FtsH_ext 136..230 CDD:284011 21/94 (22%)
FtsH_fam 238..733 CDD:273520 66/232 (28%)
AAA 333..466 CDD:278434 47/129 (36%)
Peptidase_M41 548..731 CDD:279742
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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