DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and Y47C4A.1

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001362034.1 Gene:Y47C4A.1 / 189973 WormBaseID:WBGene00021615 Length:388 Species:Caenorhabditis elegans


Alignment Length:100 Identity:32/100 - (32%)
Similarity:48/100 - (48%) Gaps:2/100 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 SAFDGLNRITFSGLLNCLDGVGS-TEARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLE 363
            |...|....|.:.||..:|.:|| ..|.:|..:||..|.||.||:||||.|....|...|..:.:
 Worm    62 SGGSGEEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERK 126

  Fly   364 EMFKNFFASSDTTKA-EEFGKRVNSFGRSASPAQI 397
            :||:.:........| :|:.:|:.....|.:.|.|
 Worm   127 DMFELYMRKIKLDHAPQEYSQRLAVLTPSFTGADI 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980
RecA-like_BCS1 202..354 CDD:410918 22/54 (41%)
Y47C4A.1NP_001362034.1 FtsH_fam 24..370 CDD:273520 31/99 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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