DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4908 and bcs-1

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001022191.1 Gene:bcs-1 / 174372 WormBaseID:WBGene00010042 Length:442 Species:Caenorhabditis elegans


Alignment Length:421 Identity:203/421 - (48%)
Similarity:274/421 - (65%) Gaps:3/421 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DLVAGLSSNPYFGAGFGLFGVGAAAAILRKGLQGGVILFRRHCMITLEVPCRDKSYQWLLKWITI 69
            ||...|:.||||.||.||.|:|.|.:.||:..|.....|||..||.|::...|.:|.|||.:|..
 Worm    23 DLYDNLNQNPYFNAGAGLAGIGIAMSFLRRTAQISNTYFRRRFMINLQINNEDAAYPWLLDFINN 87

  Fly    70 RGARKTQHLSVETNFVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERTREQQTLDLH-MGVPW 133
            |.|.:|::||..|...|.::|..:.|..|:|..|.|.|.:...||:|||.||:|.:... :..|:
 Worm    88 RSATQTRNLSANTVVHQAESGKTELSISFLPGHGTHFFVHDYRWIKVERQREKQVIQRDGIRTPF 152

  Fly   134 ETVTLTAFGNNKGIYFDILEEARQLALEATEGKTVLYTAMGAEWRPFGHPRRRRPTGSVVLDRGT 198
            ||||||..|::...:..:||::.:.|::..|...|:|.|:|.:|..||.||::|...||:||...
 Worm   153 ETVTLTTLGSDVKFFKRMLEQSAKEAIDNAETGLVIYQAVGPQWIRFGVPRKKRDIESVILDGRI 217

  Fly   199 SQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNLSERGLT 263
            .:.::.|.|:||.|:.||..||:|||||||.|||||.||||||:|||....||||||:||||.|.
 Worm   218 CEELVEDFQEFISSATWYADRGVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSERTLD 282

  Fly   264 DDRLNHLLNVAPEQSIILLEDIDAAFVSREATPQQKSAFDGLNRITFSGLLNCLDGVGSTEARIV 328
            |||||||||.||..|:::||||||||||||.......|:.||:|:|||||||.||||...|.|:.
 Worm   283 DDRLNHLLNTAPPNSVVILEDIDAAFVSREDPMSNHPAYQGLSRVTFSGLLNALDGVACAEERLT 347

  Fly   329 FMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNFFAS-SDTTKAEEFGKRVNSFGRSA 392
            ||||||::||||||:||||:|.|:|.|..|...|.:||..|:.. ||:..|:||.|||:......
 Worm   348 FMTTNYVERLDPALIRPGRVDRKQYFGNATDGMLSKMFSRFYRQPSDSVLADEFVKRVSEHKTEL 412

  Fly   393 SPAQIQGFFMKHKLSSPQTVIDSCEDIWENV 423
            |||.|||.|:.:| ..|:..:|:.:::::.|
 Worm   413 SPAMIQGHFLMYK-QDPRAALDNIKNMFKTV 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 62/169 (37%)
RecA-like_BCS1 202..354 CDD:410918 100/151 (66%)
bcs-1NP_001022191.1 BCS1_N 42..211 CDD:214980 62/168 (37%)
AAA 243..377 CDD:214640 91/133 (68%)
AAA 246..374 CDD:278434 87/127 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163841
Domainoid 1 1.000 183 1.000 Domainoid score I2047
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3193
Inparanoid 1 1.050 396 1.000 Inparanoid score I1115
Isobase 1 0.950 - 0 Normalized mean entropy S476
OMA 1 1.010 - - QHG53752
OrthoDB 1 1.010 - - D365561at33208
OrthoFinder 1 1.000 - - FOG0005110
OrthoInspector 1 1.000 - - oto18239
orthoMCL 1 0.900 - - OOG6_101424
Panther 1 1.100 - - LDO PTHR23070
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R132
SonicParanoid 1 1.000 - - X279
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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