DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4908 and Psmc1

DIOPT Version :9

Sequence 1:	NP_609358.1	Gene:	CG4908 / 34360	FlyBaseID:	FBgn0032195	Length:	431	Species:	Drosophila melanogaster
Sequence 2:	NP_476464.1	Gene:	Psmc1 / 117263	RGDID:	621097	Length:	440	Species:	Rattus norvegicus

Alignment Length:	344	Identity:	93/344 - (27%)
Similarity:	135/344 - (39%)	Gaps:	84/344 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    48 MITLEVPCRDKSYQWLLKWITIRGARKTQHLSVETNFVQNDNGTIKTSYDFIPSIGKHLFQYKGN 112
            ::|....||.|    |||...|:     .:|.:|..|::|..                  |.|.
  Rat    51 LVTPHTQCRLK----LLKLERIK-----DYLLMEEEFIRNQE------------------QMKP- 87

  Fly   113 WIQVERTREQQTLDLHMGVPWETVTL------------TAFGNNKGIYF------DILEEARQLA 159
             ::.::..|:..:|...|.|....||            |:.|:...:..      |:||....:.
  Rat    88 -LEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVL 151

  Fly   160 L----EATEGKTV-----LYTAMGAEWRPFGHPRRRRPTGSVVLDRGTSQRIIADCQDFIKSSL- 214
            |    .|..|..:     |.|.|..|..|          .....|.|.....|.:.::.::..|
  Rat   152 LNHKVHAVIGVLMDDTDPLVTVMKVEKAP----------QETYADIGGLDNQIQEIKESVELPLT 206

  Fly   215 ---WYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYS---VCLLNLSERGLTD--DRLNHLL 271
               :|.:.||...:|.:||||||.||:....|:|.:...:   |....|.::.|.|  ..:..|.
  Rat   207 HPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELF 271

  Fly   272 NVAPEQ--SIILLEDIDAAFVSREATPQQKSAFDGLNRI--TFSGLLNCLDGVGSTEARIVFMTT 332
            .||.|.  ||:.:::|||.     .|.:..|...|...|  |...|||.|||..|.....|.|.|
  Rat   272 RVAEEHAPSIVFIDEIDAI-----GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 331

  Fly   333 NYIDRLDPALVRPGRIDLK 351
            |.|:.|||||:||||||.|
  Rat   332 NRIETLDPALIRPGRIDRK 350

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4908	NP_609358.1	BCS1_N	23..192	CDD:214980	33/170 (19%)
CG4908	NP_609358.1	RecA-like_BCS1	202..354	CDD:410918	58/163 (36%)
Psmc1	NP_476464.1	PTZ00361	1..440	CDD:185575	93/344 (27%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..49
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	84..104		4/21 (19%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910