DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4908 and Afg3l1

DIOPT Version :9

Sequence 1:NP_609358.1 Gene:CG4908 / 34360 FlyBaseID:FBgn0032195 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_473411.2 Gene:Afg3l1 / 114896 MGIID:1928277 Length:789 Species:Mus musculus


Alignment Length:377 Identity:94/377 - (24%)
Similarity:149/377 - (39%) Gaps:112/377 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EVPCRDKSYQWLLKWITIRGARKTQHLSVETNFVQNDNGTIKTSYDFIPSIG-----KHLFQY-- 109
            |.|..||.::.|    .:.||      .|...|:          |.:....|     ||..||  
Mouse   131 EFPWDDKDFRSL----AVLGA------GVAAGFL----------YFYFRDPGKEITWKHFVQYYL 175

  Fly   110 -KGNWIQVERTREQQTLDLHMGVPWETVTLTAFGNNKGIYFDI---------LEEAR-QLALEAT 163
             :|...::|...:|....:  .||..|       :.:.::|:|         ||.|: :|.:|.|
Mouse   176 ARGLVDRLEVVNKQFVRVI--PVPGTT-------SERFVWFNIGSVDTFERNLESAQWELGIEPT 231

  Fly   164 EGKTVLYT--AMGAEWRPFG----------HPRRRRPTGSVVLDRG--------TSQRI------ 202
            ....|:||  :.|:..|...          :..||.|.|:....||        |:.:|      
Mouse   232 NQAAVVYTTESDGSFLRSLVPTLVLVSILLYAMRRGPMGTGRGGRGGGLFSVGETTAKILKNNID 296

  Fly   203 -----IADCQD----------FIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSV 252
                 :|.|::          |:|:...|...|....:|.:|.||||.||:....|.|||.....
Mouse   297 VRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPF 361

  Fly   253 CLLNLSE-----RGLTDDRLNHLLNVAPEQS--IILLEDIDAAFVSRE-------ATPQQKSAFD 303
            ..:|.||     .|:...|:..:..:|.:.:  |:.:::|||  :.|:       ...:|::   
Mouse   362 ITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDA--IGRKRGRGHLGGQSEQEN--- 421

  Fly   304 GLNRITFSGLLNCLDGVGSTEARIVFMTTNYIDRLDPALVRPGRIDLKEYIG 355
                 |.:.:|..:||..|:...:|...||..|.|||||.||||.|.:.|||
Mouse   422 -----TLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIG 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4908NP_609358.1 BCS1_N 23..192 CDD:214980 38/169 (22%)
RecA-like_BCS1 202..354 CDD:410918 50/186 (27%)
Afg3l1NP_473411.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..121
FtsH_ext 142..233 CDD:284011 25/119 (21%)
FtsH_fam 281..738 CDD:273520 54/198 (27%)
AAA 337..468 CDD:278434 43/140 (31%)
Peptidase_M41 554..736 CDD:279742
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 749..789
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.