Protein Alignment Prosalpha6 and Psmb1

DIOPT Version :9

• Sequence 1: NP_001285798.1
• Gene: Prosalpha6 / 34359
• FlyBaseID: FBgn0250843
• Length: 279
• Species: Drosophila melanogaster
• Sequence 2: NP_446042.1
• Gene: Psmb1 / 94198
• RGDID: 621092
• Length: 240
• Species: Rattus norvegicus
• Alignment Length: 248
• Identity: 55/248 - (22%)
• Similarity: 91/248 - (36%)
• Gaps: 50/248 - (20%)

  Fly    12 VWSPQGRLHQVE-----YAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQR---KIIPIDD 68
            |..|||....|:     ||..    |...:.:..:|::::.:..:.:...|...|   |...:.|
  Rat    15 VMGPQGSAGPVQMRFSPYAFN----GGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTD 75

  Fly    69 HLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTT--------TQRYDR 125
            ...|..:|...|...|::.:.:....||||              .||..||        |..|.|
  Rat    76 KTVIGCSGFHGDCLTLTKIIEARLKMYKHS--------------NNKAMTTGAIAAMLSTILYSR 126

  Fly   126 R--PYGVGLLVAGYDERGP-HIYQVTPSATFFNCKANSIGSRSQSARTYLE-----KNLN--KFL 180
            |  ||.|..::.|.||.|. .:|...|..::......:.||.|...:..|:     ||:.  :.:
  Rat   127 RFFPYYVYNIIEGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHV 191

  Fly   181 DSSKDEIIRHGIRAILGTLPTDEQGKDAGQYDITVAIVGKD--QPFTILSNKD 231
            ..:.|..:|......:.....|....||    :.:.||.|:  :..|:...||
  Rat   192 PLTLDRAMRLVKDVFISAAERDVYTGDA----LRICIVTKEGIREETVPLRKD 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prosalpha6	NP_001285798.1	PRE1	4..231	CDD:223711	53/246 (22%)
		proteasome_alpha_type_1	6..219	CDD:239718	50/232 (22%)
Psmb1	NP_446042.1	proteasome_beta_type_1	29..240	CDD:239726	48/232 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0638
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810