DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and PRE1

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_010928.1 Gene:PRE1 / 856731 SGDID:S000000814 Length:198 Species:Saccharomyces cerevisiae


Alignment Length:192 Identity:41/192 - (21%)
Similarity:82/192 - (42%) Gaps:15/192 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VGLKNKDYAVLV---ALCKPTSELSDTQRKIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKH 97
            :|::.:|..:|.   |:.:..|.|.|:..|...:..|..:|.||...|....:.|:::....|..
Yeast     5 LGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSI 69

  Fly    98 SYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDER--GPHIYQVTPSATFFNCKANS 160
            ..|  |.:|....:...:.:.......||||.|.:|:.|||::  .|.:||:....|.......:
Yeast    70 RED--YELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGA 132

  Fly   161 IGSRSQSARTYLEKNLNKFLDSSKD-EIIRHGIRAILGTLPTDEQGKDAGQYDITVAIVGKD 221
            .|.......:.|:.:....:.:.:. ::::..::.:...:|.|.:|       :.|.||.||
Yeast   133 HGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKG-------VIVKIVDKD 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 41/192 (21%)
proteasome_alpha_type_1 6..219 CDD:239718 38/188 (20%)
PRE1NP_010928.1 proteasome_beta_type_2 1..194 CDD:239727 41/192 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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