DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and SCL1

DIOPT Version :10

Sequence 1:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_011504.3 Gene:SCL1 / 852873 SGDID:S000002979 Length:252 Species:Saccharomyces cerevisiae


Alignment Length:246 Identity:71/246 - (28%)
Similarity:120/246 - (48%) Gaps:14/246 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDSDVTVWSPQGRLHQVEYAMEAV-KLGTATVGLKNKDYAVLVALCKPTSELSD--TQRKIIPID 67
            ||..:|::||:|||:|||||.:|. :....::.::.||..|:::..|...:|.|  |...|..|.
Yeast    12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCIS 76

  Fly    68 DHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGL 132
            ..:|:.:.|...|||..:...::|...:::.|....|...|...:.|..|..|||...||.||.|
Yeast    77 RTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVIL 141

  Fly   133 LVAGYDER-GPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNK-----FLDSSKDEIIRHG 191
            .....||. ||.||:..|:..:...||.:.|.:.|...|.||.:..|     ..:.|.::::...
Yeast   142 TFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFA 206

  Fly   192 IRAILGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVAIAKEN 242
            |..::     |..|.:..:.|:.|.:..||:.||:.:.....:.||||:::
Yeast   207 ITHMI-----DALGTEFSKNDLEVGVATKDKFFTLSAENIEERLVAIAEQD 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 63/221 (29%)
SCL1NP_011504.3 proteasome_alpha_type_6 12..228 CDD:239723 63/220 (29%)

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