DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6 and PAE1

DIOPT Version :9

Sequence 1:NP_001285798.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001077717.1 Gene:PAE1 / 841822 AraportID:AT1G53850 Length:237 Species:Arabidopsis thaliana


Alignment Length:199 Identity:82/199 - (41%)
Similarity:116/199 - (58%) Gaps:15/199 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MF--RNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSD--TQR 61
            ||  |.:||..|..:||:|||.|||||:||:|||:..:|:|.|:..||....:.||.|.:  :..
plant     1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVE 65

  Fly    62 KIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSY-------DTTYPVSRLITNLGNKMQTT 119
            ||:.||||:|.:::||.||||.|..:.|.|..|::.||       .||..:..|....|...:.:
plant    66 KIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEES 130

  Fly   120 TQRYDRRPYGVGLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSK 184
            ..    ||:||.||:||:||.||.:|...||.||:.|.|.:|||.|:.|.:.|::..||.|...:
plant   131 MS----RPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQE 191

  Fly   185 DEII 188
            .|.|
plant   192 AETI 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6NP_001285798.1 PRE1 4..231 CDD:223711 79/194 (41%)
proteasome_alpha_type_1 6..219 CDD:239718 79/192 (41%)
PAE1NP_001077717.1 proteasome_alpha_type_5 8..218 CDD:239722 79/192 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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